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Rigid substructure search.
Shirvanyants D, Alexandrova AN, Dokholyan NV. Shirvanyants D, et al. Bioinformatics. 2011 May 1;27(9):1327-9. doi: 10.1093/bioinformatics/btr129. Epub 2011 Apr 1. Bioinformatics. 2011. PMID: 21460026 Free PMC article.
Computational design of a PAK1 binding protein.
Jha RK, Leaver-Fay A, Yin S, Wu Y, Butterfoss GL, Szyperski T, Dokholyan NV, Kuhlman B. Jha RK, et al. J Mol Biol. 2010 Jul 9;400(2):257-70. doi: 10.1016/j.jmb.2010.05.006. Epub 2010 May 10. J Mol Biol. 2010. PMID: 20460129 Free PMC article.
Hybrid dynamics simulation engine for metalloproteins.
Sparta M, Shirvanyants D, Ding F, Dokholyan NV, Alexandrova AN. Sparta M, et al. Biophys J. 2012 Aug 22;103(4):767-76. doi: 10.1016/j.bpj.2012.06.024. Biophys J. 2012. PMID: 22947938 Free PMC article.
44 results