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UniProt Tools.
Pundir S, Martin MJ, O'Donovan C; UniProt Consortium. Pundir S, et al. Curr Protoc Bioinformatics. 2016 Mar 24;53:1.29.1-1.29.15. doi: 10.1002/0471250953.bi0129s53. Curr Protoc Bioinformatics. 2016. PMID: 27010333 Free PMC article.
The new NHGRI-EBI Catalog of published genome-wide association studies (GWAS Catalog).
MacArthur J, Bowler E, Cerezo M, Gil L, Hall P, Hastings E, Junkins H, McMahon A, Milano A, Morales J, Pendlington ZM, Welter D, Burdett T, Hindorff L, Flicek P, Cunningham F, Parkinson H. MacArthur J, et al. Nucleic Acids Res. 2017 Jan 4;45(D1):D896-D901. doi: 10.1093/nar/gkw1133. Epub 2016 Nov 29. Nucleic Acids Res. 2017. PMID: 27899670 Free PMC article.
Database resources for the tuberculosis community.
Lew JM, Mao C, Shukla M, Warren A, Will R, Kuznetsov D, Xenarios I, Robertson BD, Gordon SV, Schnappinger D, Cole ST, Sobral B. Lew JM, et al. Tuberculosis (Edinb). 2013 Jan;93(1):12-7. doi: 10.1016/j.tube.2012.11.003. Epub 2013 Jan 17. Tuberculosis (Edinb). 2013. PMID: 23332401 Free PMC article. Review.
Ten simple rules for running interactive workshops.
Pavelin K, Pundir S, Cham JA. Pavelin K, et al. PLoS Comput Biol. 2014 Feb 27;10(2):e1003485. doi: 10.1371/journal.pcbi.1003485. eCollection 2014 Feb. PLoS Comput Biol. 2014. PMID: 24586135 Free PMC article. No abstract available.
A standardized framework for representation of ancestry data in genomics studies, with application to the NHGRI-EBI GWAS Catalog.
Morales J, Welter D, Bowler EH, Cerezo M, Harris LW, McMahon AC, Hall P, Junkins HA, Milano A, Hastings E, Malangone C, Buniello A, Burdett T, Flicek P, Parkinson H, Cunningham F, Hindorff LA, MacArthur JAL. Morales J, et al. Genome Biol. 2018 Feb 15;19(1):21. doi: 10.1186/s13059-018-1396-2. Genome Biol. 2018. PMID: 29448949 Free PMC article.
Searching and Navigating UniProt Databases.
Pundir S, Magrane M, Martin MJ, O'Donovan C; UniProt Consortium. Pundir S, et al. Curr Protoc Bioinformatics. 2015 Jun 19;50:1.27.1-1.27.10. doi: 10.1002/0471250953.bi0127s50. Curr Protoc Bioinformatics. 2015. PMID: 26088053 Free PMC article.
A fast Peptide Match service for UniProt Knowledgebase.
Chen C, Li Z, Huang H, Suzek BE, Wu CH; UniProt Consortium. Chen C, et al. Bioinformatics. 2013 Nov 1;29(21):2808-9. doi: 10.1093/bioinformatics/btt484. Epub 2013 Aug 19. Bioinformatics. 2013. PMID: 23958731 Free PMC article.
17 results