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Perspectives on tracking data reuse across biodata resources.
Ross KE, Bastian FB, Buys M, Cook CE, D'Eustachio P, Harrison M, Hermjakob H, Li D, Lord P, Natale DA, Peters B, Sternberg PW, Su AI, Thakur M, Thomas PD, Bateman A; and the UniProt Consortium. Ross KE, et al. Bioinform Adv. 2024 Apr 25;4(1):vbae057. doi: 10.1093/bioadv/vbae057. eCollection 2024. Bioinform Adv. 2024. PMID: 38721398 Free PMC article.
FAIR adoption, assessment and challenges at UniProt.
Garcia L, Bolleman J, Gehant S, Redaschi N, Martin M; UniProt Consortium. Garcia L, et al. Sci Data. 2019 Sep 20;6(1):175. doi: 10.1038/s41597-019-0180-9. Sci Data. 2019. PMID: 31541106 Free PMC article.
Annotation of biologically relevant ligands in UniProtKB using ChEBI.
Coudert E, Gehant S, de Castro E, Pozzato M, Baratin D, Neto T, Sigrist CJA, Redaschi N, Bridge A; UniProt Consortium. Coudert E, et al. Bioinformatics. 2023 Jan 1;39(1):btac793. doi: 10.1093/bioinformatics/btac793. Bioinformatics. 2023. PMID: 36484697 Free PMC article.
UniRule: a unified rule resource for automatic annotation in the UniProt Knowledgebase.
MacDougall A, Volynkin V, Saidi R, Poggioli D, Zellner H, Hatton-Ellis E, Joshi V, O'Donovan C, Orchard S, Auchincloss AH, Baratin D, Bolleman J, Coudert E, de Castro E, Hulo C, Masson P, Pedruzzi I, Rivoire C, Arighi C, Wang Q, Chen C, Huang H, Garavelli J, Vinayaka CR, Yeh LS, Natale DA, Laiho K, Martin MJ, Renaux A, Pichler K; UniProt Consortium. MacDougall A, et al. Bioinformatics. 2020 Nov 1;36(17):4643-4648. doi: 10.1093/bioinformatics/btaa485. Bioinformatics. 2020. PMID: 32399560 Free PMC article.