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9 pages, 1716 KiB  
Article
Adsorption and Catalytic Reduction of Nitrogen Oxides (NO, N2O) on Disulfide Cluster Complexes of Cobalt and Iron—A Density Functional Study
by Ellie L. Uzunova and Ivelina M. Georgieva
Materials 2024, 17(19), 4764; https://doi.org/10.3390/ma17194764 (registering DOI) - 28 Sep 2024
Abstract
The reactivity of nitrogen oxide, NO, as a ligand in complexes with [Fe2-S2] and [Co2-S2] non-planar rhombic cores is examined by density functional theory (DFT). The cobalt-containing nitrosyl complexes are less stable than the iron complexes because the Co-S bonds in the [Co2-S2] [...] Read more.
The reactivity of nitrogen oxide, NO, as a ligand in complexes with [Fe2-S2] and [Co2-S2] non-planar rhombic cores is examined by density functional theory (DFT). The cobalt-containing nitrosyl complexes are less stable than the iron complexes because the Co-S bonds in the [Co2-S2] core are weakened upon NO coordination. Various positions of NO were examined, including its binding to sulfur centers. The release of NO molecules can be monitored photochemically. The ability of NO to form a (NO)2 dimer provides a favorable route of electrochemical reduction, as protonation significantly stabilizes the dimeric species over the monomers. The quasilinear dimer ONNO, with trans-orientation of oxygen atoms, gains higher stability under protonation and reduction via proton–electron transfer. The first two reduction steps lead to an N2O intermediate, whose reduction is more energy demanding: in the two latter reaction steps the highest energy barrier for Co2S2(CO)6 is 109 kJ mol−1, and for Fe2S2(CO)6, it is 133 kJ mol−1. Again, the presence of favorable light absorption bands allows for a photochemical route to overcome these energy barriers. All elementary steps are exothermic, and the final products are molecular nitrogen and water. Full article
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19 pages, 2197 KiB  
Article
Antimicrobial Activity of Anionic Bis(N-Heterocyclic Carbene) Silver Complexes
by Carlos J. Carrasco, Francisco Montilla, Eduardo Villalobo, Manuel Angulo, Eleuterio Álvarez and Agustín Galindo
Molecules 2024, 29(19), 4608; https://doi.org/10.3390/molecules29194608 (registering DOI) - 27 Sep 2024
Abstract
The antimicrobial properties of a series of anionic bis(carbene) silver complexes Na3[Ag(NHCR)2] were investigated (2a2g and 2c′, where NHCR is a 2,2′-(imidazol-2-ylidene)dicarboxylate-type N-heterocyclic carbene). The complexes were synthesized by the interaction [...] Read more.
The antimicrobial properties of a series of anionic bis(carbene) silver complexes Na3[Ag(NHCR)2] were investigated (2a2g and 2c′, where NHCR is a 2,2′-(imidazol-2-ylidene)dicarboxylate-type N-heterocyclic carbene). The complexes were synthesized by the interaction of imidazolium dicarboxylate compounds with silver oxide in the presence of aqueous sodium hydroxide. Complexes 2f,g were characterized analytically and spectroscopically, and the ligand precursor 1f and complexes 2c and 2g were structurally identified by X-ray diffraction methods. The anions of 2c and 2g, [Ag(NHCR)2]3−, showed a typical linear disposition of Ccarbene-Ag-Ccarbene atoms and an uncommonly eclipsed conformation of carbene ligands. The antimicrobial properties of complexes 2ag, which contains chiral (2b2e and 2c′) and non-chiral derivatives (2a,f,g), were evaluated against Gram-negative bacteria, Escherichia coli and Pseudomonas aeruginosa, and a Gram-positive bacterium, Staphylococcus aureus. From the observed values of the minimal inhibitory concentration and minimal bactericidal concentration, complexes 2a and 2b showed the best antimicrobial activity against all strains. An interesting chirality–antimicrobial relationship was found, and eutomer 2c′ showed better activity than its enantiomer 2c against the three bacteria. Furthermore, these complexes were investigated experimentally and theoretically by 109Ag nuclear magnetic resonance, and the electronic and steric characteristics of the dianionic carbene ligands were also examined. Full article
(This article belongs to the Special Issue Exclusive Feature Papers on Molecular Structure)
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10 pages, 419 KiB  
Article
First Principles Study of the Phase Stability, the Li Ionic Diffusion, and the Conductivity of the Li10GexMo1−xP2S12 of Superionic Conductors
by Yifang Wu, Yuanzhen Chen and Shaokun Chong
Batteries 2024, 10(10), 344; https://doi.org/10.3390/batteries10100344 - 27 Sep 2024
Abstract
Using first-principles density functional theory (DFT) calculations and ab initio molecular dynamics (AIMD) simulations, we performed this study on the phase stability, the intrinsic redox stability, and the Li+ conductivity of Li10GexMo1-xP2S12 (x [...] Read more.
Using first-principles density functional theory (DFT) calculations and ab initio molecular dynamics (AIMD) simulations, we performed this study on the phase stability, the intrinsic redox stability, and the Li+ conductivity of Li10GexMo1-xP2S12 (x = 0~1) superionic conductors. Molybdenum (Mo) is expected to replace expensive germanium (Ge) to lower tmaterial costs, reduce sensitivity to ambient water and oxygen, and achieve acceptable Li+ conductivity. The ab initio first principle molecular dynamics simulations show that room-temperature Li+ conductivity is 1.12 mS·cm−1 for the Li10Ge0.75Mo0.25P2S12 compound, which is comparable to the theoretical value of 6.81 mS·cm−1 and the experimental measured one of 12 mS·cm−1 of the Li10GeP2S12 (LGPS) structure. For Li10GexMo1-xP2S12 (x = 0, 0.25, 0.5 and 1) compounds, the density of states and the projection fractional wave state density were calculated. It was found that when Ge atoms were partially replaced by Mo atoms, the band gap remained unchanged at 2.5 eV, but deep level defects appeared in Mo-substituted compounds. Fortunately, this deep level defect is difficult to ionize at room temperature, so it has no effect on the electronic conductivity of Mo substitute compounds, making Mo substitution a suitable solution for electrolyte materials. The projection fractional wave state density calculation shows that the covalent bond between Mo and S is stronger than that between Ge and S, which reduces the sensitivity of Mo-substituted compounds to water and oxygen contents in the air. In addition, the partial state density coincidence curve between Li and S elements disappears in the 25% Mo-substituted compound with energies of 4–5 eV, indicating that the Li2S by-product is decreased. Full article
12 pages, 4587 KiB  
Article
Insights into the Structural Modification of Selenium-Doped Derivatives with Narrowband Emissions: A Theory Study
by Qing Zhang, Tao Liu, Xin Huang, Kunyan Wang, Fangxiang Sun, Xin Wang and Chunyan Lv
Molecules 2024, 29(19), 4589; https://doi.org/10.3390/molecules29194589 - 27 Sep 2024
Abstract
The research on boron/nitrogen (B/N)-based multiresonance thermally activated delayed fluorescence (MR-TADF) emitters has been a prominent topic due to their narrowband emission and high luminous efficiency. However, devices derived from the common types of narrowband TADF materials often experience an efficiency roll-off, which [...] Read more.
The research on boron/nitrogen (B/N)-based multiresonance thermally activated delayed fluorescence (MR-TADF) emitters has been a prominent topic due to their narrowband emission and high luminous efficiency. However, devices derived from the common types of narrowband TADF materials often experience an efficiency roll-off, which could be ascribed to their relatively slow triplet–singlet exciton interconversion. Since inserting the heavy Se atom into the B/N scheme has been a proven strategy to address the abovementioned issues, herein, extensive density functional theory (DFT) and time-dependent DFT (TD-DFT) simulations have been employed to explore the effects of the structural modification on a series of structurally modified selenium-doped derivatives. Furthermore, the two-layered ONIOM (QM/MM) model has been employed to study the pressure effects on the crystal structure and photophysical properties of the pristine CzBSe. The theoretical results found that the introduced tert-butyl units in Cz-BSeN could result in a shorter charge transfer distance and smaller reorganization energy than the parent CzBSe. In contrast to directly incorporating the o-carborane (Cb) unit to CzBSe, incorporating the bridged phenyl units is important in order to achieve narrowband emissions and high luminous efficiency. The lowest three triplet excited states of CzBSe, Cz-BSeN and PhCb-BSeN all contribute to their triplet–singlet exciton conversions, resulting in a high utilization of triplet excitons. The pressure has an evident influence on the photophysical properties of the aggregated CzBSe and is favored for obtaining narrowband emissions. Our work is promised to provide a feasible strategy for designing selenium-doped derivatives with narrowband emissions and rapid triplet–singlet exciton interconversions. Full article
(This article belongs to the Section Molecular Structure)
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9 pages, 6287 KiB  
Article
Chemical Activation Boosted Interface Interaction between Poly(tetrafluoroethylene-co-hexafluoropropylene) Film and Silver Coating
by Hu Wang, Xiuqi Guo, Xuelei Li, Chenliang Gong and Yongqing Zhao
Polymers 2024, 16(19), 2730; https://doi.org/10.3390/polym16192730 - 26 Sep 2024
Abstract
To enhance the interfacial adhesion between poly(tetrafluoroethylene-co-hexafluoropropylene) (FEP) film and functional coatings, such as silver (Ag) coating, among others, the surface activation of FEP film has to be performed. Among various activation strategies, chemical activation, such as using naphthalene sodium system, is one [...] Read more.
To enhance the interfacial adhesion between poly(tetrafluoroethylene-co-hexafluoropropylene) (FEP) film and functional coatings, such as silver (Ag) coating, among others, the surface activation of FEP film has to be performed. Among various activation strategies, chemical activation, such as using naphthalene sodium system, is one of the most efficient methods. However, the effect of chemical activation on the interface interaction between the activated FEP and functional coating is rarely investigated. Herein, the FEP film was activated by naphthalene sodium solution under different conditions, and then the Ag layer was coated onto its surface by vacuum Ag deposition. Based on experimental results and density function theory (DFT) calculation, it is indicated that oxygen-containing functional groups (such as C=O and C–OH groups), introduced onto the surface of FEP by the chemical activation, play a key role in boosting the interface interaction, which is due to the strong interaction between the oxygen-containing functional groups and Ag atoms. In addition, the concentration of naphthalene sodium solution, activation time, and winding speed of Ag- deposition can have a significant impact on the microstructures of Ag coating and the interfacial adhesion between the activated FEP and Ag coating. Under the conditions of high concentration (0.9 M), medium activation time (15 min), and high winding speed (0.8 m min−1), there is the best interface adhesion. Full article
(This article belongs to the Special Issue Challenges and Trends in Polymer Composites—2nd Edition)
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22 pages, 5377 KiB  
Article
Effect of Volume Fraction of Carbon Nanotubes on Structure Formation in Polyacrylonitrile Nascent Fibers: Mesoscale Simulations
by Pavel Komarov, Maxim Malyshev, Pavel Baburkin and Daria Guseva
ChemEngineering 2024, 8(5), 97; https://doi.org/10.3390/chemengineering8050097 - 26 Sep 2024
Abstract
We present a mesoscale model and the simulation results of a system composed of polyacrylonitrile (PAN), carbon nanotubes (CNTs), and a mixed solvent of dimethylsulfoxide (DMSO) and water. The model describes a fragment of a nascent PAN/CNT composite fiber during coagulation. This process [...] Read more.
We present a mesoscale model and the simulation results of a system composed of polyacrylonitrile (PAN), carbon nanotubes (CNTs), and a mixed solvent of dimethylsulfoxide (DMSO) and water. The model describes a fragment of a nascent PAN/CNT composite fiber during coagulation. This process represents one of the stages in the production of PAN composite fibers, which are considered as precursors for carbon fibers with improved properties. All calculations are based on dynamic density functional theory. The results obtained show that the greatest structural heterogeneity of the system is observed when water dominates in the composition of the mixed solvent, which is identified with the conditions of a non-solvent coagulation bath. The model also predicts that the introduction of CNTs can lead to an increase in structural heterogeneity in the polymer matrix with increasing water content in the system. In addition, it is shown that the presence of a surface modifier on the CNT surface, which increases the affinity of the filler to the polymer, can sufficiently reduce the inhomogeneity of the nascent fiber structure. Full article
(This article belongs to the Special Issue Engineering of Carbon-Based Nano/Micromaterials)
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13 pages, 5284 KiB  
Article
Effect of Surface Anions Adsorbed by Rutile TiO2 (001) on Photocatalytic Nitrogen Reduction Reaction: A Density Functional Theory Calculation
by Xiaoyu Jiang, Mengyuan Gao and Hongda Li
Molecules 2024, 29(19), 4566; https://doi.org/10.3390/molecules29194566 - 25 Sep 2024
Abstract
The adsorption of common anions found in water can have a considerable impact on the surface state and optical characteristics of titanium dioxide (TiO2), which has an important impact on the photocatalytic nitrogen reduction reaction (NRR). This work utilizes density functional [...] Read more.
The adsorption of common anions found in water can have a considerable impact on the surface state and optical characteristics of titanium dioxide (TiO2), which has an important impact on the photocatalytic nitrogen reduction reaction (NRR). This work utilizes density functional theory (DFT) computations to examine the electronic and optical characteristics of the TiO2 (001) surface under various anion adsorptions in order to clarify their influence on the photocatalytic NRR of TiO2. The modifications in the structure, optical, and electronic properties of TiO2 before and after anion adsorption are investigated. In addition, the routes of Gibbs free energy for the NRR are also evaluated. The results indicate that the adsorption of anions modifies the surface characteristics of TiO2 to a certain degree, hence impacting the separating and recombining charge carriers by affecting the energy gap of TiO2. More importantly, the adsorption of anions can increase the energy barriers for the NRR, thereby exerting a detrimental effect on its photocatalytic activity. These findings provide a valuable theoretical contribution to understanding the photocatalytic reaction process of TiO2 and its potential application of NRR in the actual complex water phase. Full article
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11 pages, 6169 KiB  
Article
Nonprecious Single Atom Catalyst for Methane Pyrolysis
by Naomi Helsel, Sanchari Chowdhury and Pabitra Choudhury
Molecules 2024, 29(19), 4541; https://doi.org/10.3390/molecules29194541 - 25 Sep 2024
Abstract
The development of a suitable catalytic system for methane pyrolysis reactions requires a detailed investigation of the activation energy of C-H bonds on catalysts, as well as their stability against sintering and coke formation. In this work, both single-metal Ni atoms and small [...] Read more.
The development of a suitable catalytic system for methane pyrolysis reactions requires a detailed investigation of the activation energy of C-H bonds on catalysts, as well as their stability against sintering and coke formation. In this work, both single-metal Ni atoms and small clusters of Ni atoms deposited on titanium nitride (TiN) plasmonic nanoparticles were characterized for the C-H bond activation of a methane pyrolysis reaction using ab initio spin-polarized density functional theory (DFT) calculations. The present work shows the complete reaction pathway, including energy barriers for C-H bond activation and dehydrogenated fragments, during the methane pyrolysis reaction on catalytic systems. Interestingly, the C-H bond activation barriers were low for both Ni single-atom and Ni-clusters, showing the energy barriers of ~1.10 eV and ~0.88 eV, respectively. Additionally, single-atom Ni-TiN showed weaker binding to adsorbates, and a net endothermic reaction pathway indicated that the single-atom Ni-TiN was expected to resist coke formation on its surface. However, these Ni single-atom catalysts can sinter, aggregate into a small cluster, and form a coke layer from the highly exothermic reaction pathway that the cluster takes despite the facile reaction pathway. Full article
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12 pages, 3037 KiB  
Article
Density Functional Theory Study of Lanthanide Monoxides under High Pressure: Pressure-Induced B1–B2 Transition
by Sergio Ferrari and Daniel Errandonea
Crystals 2024, 14(10), 831; https://doi.org/10.3390/cryst14100831 - 25 Sep 2024
Abstract
Using density functional theory, we study the influence of hydrostatic pressure on the crystal structure of lanthanide monoxides, focusing on the monoxides formed by the fifteen elements of the lanthanide series, from La to Lu. Calculations are performed using two methods for the [...] Read more.
Using density functional theory, we study the influence of hydrostatic pressure on the crystal structure of lanthanide monoxides, focusing on the monoxides formed by the fifteen elements of the lanthanide series, from La to Lu. Calculations are performed using two methods for the ambient pressure B1 (NaCl type) structure, the general gradient approximation (GGA) and the local density approximation (LDA). Through a systematic comparison with existent experimental data, we find that the first method agrees better with the experiments. In addition, considering other cubic structures previously reported for lanthanide monoxides, as B2 (CsCl type) and B3 (ZnS type), we explore the possibility of the occurrence of pressure-induced phase transitions. Based on the better accuracy of GGA to describe the B1 phase at ambient conditions, we exclusively use GGA for the high pressure study. We find, for the fifteen studied compounds, that, at ambient pressure, the B1 structure is the one with the lowest enthalpy, being therefore the most thermodynamically stable structure. We also determine that, at elevated pressures, all the studied compounds undergo a structural phase transition to the B2 phase. We finally establish the relationship between pressure and volume of the unit cell, along with the associated isothermal equation of state, determining the bulk modulus. Full article
(This article belongs to the Special Issue Pressure-Induced Phase Transformations (Third Edition))
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32 pages, 2979 KiB  
Article
Synthesis, Absolute Configuration, Biological Profile and Antiproliferative Activity of New 3,5-Disubstituted Hydantoins
by Mladenka Jurin, Ana Čikoš, Višnja Stepanić, Marcin Górecki, Gennaro Pescitelli, Darko Kontrec, Andreja Jakas, Tonko Dražić and Marin Roje
Pharmaceuticals 2024, 17(10), 1259; https://doi.org/10.3390/ph17101259 - 24 Sep 2024
Abstract
Hydantoins, a class of five-membered heterocyclic compounds, exhibit diverse biological activities. The aim of this study was to synthesize and characterize a series of novel 3,5-disubstituted hydantoins and to investigate their antiproliferative activity against human cancer cell lines. The new hydantoin derivatives 5a [...] Read more.
Hydantoins, a class of five-membered heterocyclic compounds, exhibit diverse biological activities. The aim of this study was to synthesize and characterize a series of novel 3,5-disubstituted hydantoins and to investigate their antiproliferative activity against human cancer cell lines. The new hydantoin derivatives 5ai were prepared as racemic mixtures of syn- and anti-isomers via a base-assisted intramolecular amidolysis of C-3 functionalized β-lactams. The enantiomers of syn-5a and anti-hydantoins 5b were separated by preparative high-performance liquid chromatography (HPLC) using n-hexane/2-propanol (90/10, v/v) as the mobile phase. The absolute configuration of the four allyl hydantoin enantiomers 5a was assigned based on a comparison of the experimental electronic circular dichroism (ECD) and vibrational circular dichroism (VCD) spectra with those calculated using density functional theory (DFT). The antiproliferative activity evaluated in vitro against three different human cancer cell lines: HepG2 (liver hepatocellular carcinoma), A2780 (ovarian carcinoma), and MCF7 (breast adenocarcinoma), and on the non-tumor cell line HFF1 (normal human foreskin fibroblasts) using the MTT cell proliferation assay. In silico drug-like properties and ADMET profiles were estimated using the ADMET Predictor ver. 9.5 and the online server admetSAR. Eighteen new 3,5-disubstituted hydantoins were synthesized and characterized. The compound anti-5c showed potent cytotoxic activity against the human tumor cell line MCF7 (IC50 = 4.5 µmol/L) and the non-tumor cell line HFF1 (IC50 = 12.0 µmol/L). In silico analyzes revealed that the compounds exhibited moderate water solubility and membrane permeability and are likely substrates for CYP3A4 and P-glycoprotein and have a high probability of antiarthritic activity. Full article
(This article belongs to the Special Issue Heterocyclic Compounds in Medicinal Chemistry)
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15 pages, 5364 KiB  
Article
Insights into the Effect of a Microwave Field on the Properties of Modified γ-Alumina: A DFT Study
by Xiayu Fan, Tong Li, Hui Shang, Zonghao Xue, Jie Yang and Aijun Duan
Processes 2024, 12(10), 2064; https://doi.org/10.3390/pr12102064 - 24 Sep 2024
Abstract
γ-Alumina is often used as a support for hydrodesulfurization catalysts due to its excellent performance. During the catalytic reaction, the strong surface acidity of γ-alumina can induce a strong interaction between the active phase and the support. The reaction activity of the catalyst [...] Read more.
γ-Alumina is often used as a support for hydrodesulfurization catalysts due to its excellent performance. During the catalytic reaction, the strong surface acidity of γ-alumina can induce a strong interaction between the active phase and the support. The reaction activity of the catalyst can be affected by changing the present mode of the active phase on the surface of the support. The (110) crystal plane, acting as the strongest acidity plane of γ-alumina, was selected for modification. The supports modified with boron and phosphorus were successfully constructed, and the acid strengths were quantified by simulating the adsorption of the relevant probe molecules: pyridine in correlation with surface electronic properties via density functional theory. The surface adsorption energy calculation shows that the boron-modified surface is able to moderately reduce the adsorption capacity of alumina, while that of the surface modified by phosphorus is found to be enhanced over the sites of a tetrahedral coordination structure; however, at the other unsaturated Al sites, this is obviously reduced. The results of introducing electric fields imply that applying horizontal electric fields changes the surface acidity of alumina under the premise of a stable structure. With the enhancement of the horizontal electric fields, the adsorption capacity of tetra-coordination sites on the original surface gradually decreases, while those of the others gradually increases. However, for the boron-modified surface, introducing horizontal electric fields can reduce the adsorption capacity of all sites. Hence, microwave-electric-field-assisted modification of B further reduces the surface acidity of alumina, making it beneficial for deep hydrodesulfurization reactions. Full article
(This article belongs to the Section Materials Processes)
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19 pages, 3564 KiB  
Article
Data-Based Kinematic Viscosity and Rayleigh–Taylor Mixing Attributes in High-Energy Density Plasmas
by Snezhana I. Abarzhi and Kurt C. Williams
Atoms 2024, 12(10), 47; https://doi.org/10.3390/atoms12100047 - 24 Sep 2024
Abstract
We explore properties of matter and characteristics of Rayleigh–Taylor mixing by analyzing data gathered in the state-of-the-art fine-resolution experiments in high-energy density plasmas. The eminent quality data represent fluctuations spectra of the X-ray imagery intensity versus spatial frequency. We find, by using the [...] Read more.
We explore properties of matter and characteristics of Rayleigh–Taylor mixing by analyzing data gathered in the state-of-the-art fine-resolution experiments in high-energy density plasmas. The eminent quality data represent fluctuations spectra of the X-ray imagery intensity versus spatial frequency. We find, by using the rigorous statistical method, that the fluctuations spectra are accurately captured by a compound function, being a product of a power law and an exponential and describing, respectively, self-similar and scale-dependent spectral parts. From the self-similar part, we find that Rayleigh–Taylor mixing has steep spectra and strong correlations. From the scale-dependent part, we derive the first data-based value of the kinematic viscosity in high-energy density plasmas. Our results explain the experiments, agree with the group theory and other experiments, and carve the path for better understanding Rayleigh–Taylor mixing in nature and technology. Full article
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20 pages, 7721 KiB  
Article
Role of Multiple Intermolecular H-Bonding Interactions in Molecular Cluster of Hydroxyl-Functionalized Imidazolium Ionic Liquid: An Experimental, Topological, and Molecular Dynamics Study
by Sumit Kumar Panja, Sumit Kumar, Boumediene Haddad, Abhishek R. Patel, Didier Villemin, Hakkoum-Mohamed Amine, Sayantan Bera and Mansour Debdab
Physchem 2024, 4(4), 369-388; https://doi.org/10.3390/physchem4040026 - 24 Sep 2024
Abstract
Multiple intermolecular H-bonding interactions play a pivotal role in determining the macroscopic state of ionic liquids (ILs). Hence, the relationship between the microscopic and the macroscopic properties is key for a rational design of new imidazolium ILs. In the present work, we investigated [...] Read more.
Multiple intermolecular H-bonding interactions play a pivotal role in determining the macroscopic state of ionic liquids (ILs). Hence, the relationship between the microscopic and the macroscopic properties is key for a rational design of new imidazolium ILs. In the present work, we investigated how the physicochemical property of hydroxyl-functionalized imidazolium chloride is connected to the molecular structure and intermolecular interactions. In the isolated ion pair, strong N-H···Cl H-bonding interactions are observed rather than H-bonding interactions at the acidic C2-H site and alkyl-OH···Cl of the hydroxyl-functionalized imidazolium chloride. However, the N-H···Cl H-bonding interaction of the cation plays a significant role in ion-pair formations and polymeric clusters. For 3-(2-Hydroxy)-1H-imidazolium chloride (EtOHImCl), the oxygen atom (O) engages in two significant interactions within its homodimeric ion-pair cluster: N-H···O and alkyl OH···Cl. Vibrational spectroscopy and DFT calculations reveal that the chloride ion (Cl) forms a hydrogen bond with the C2-H group via a C2-H···Cl interaction site. Natural Bond Orbital (NBO) analysis indicates that the O-H···Cl hydrogen-bonding interaction is crucial for the stability of the IL, with a second-order perturbation energy of approximately 133.8 kJ/mol. Additional computational studies using Atoms in Molecules (AIMs), non-covalent interaction (NCI) analysis, Electron Localization Function (ELF), and Localized Orbital Locator (LOL) provide significant insights into the properties and nature of non-covalent interactions in ILs. Ab initio molecular dynamics (AIMD) simulations of the IL demonstrate its stable states with relatively low energy values around −1680.6510 atomic units (a.u.) at both 100 fs and 400 fs due to O-H···Cl and C-H···Cl interactions. Full article
(This article belongs to the Section Experimental and Computational Spectroscopy)
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16 pages, 3558 KiB  
Article
Experimental and Theoretical Studies on the Adsorption of Bromocresol Green from Aqueous Solution Using Cucumber Straw Biochar
by Chenxi Zhang, Lingbin Meng, Zhihao Fang, Youxin Xu, Yue Zhou, Hongsen Guo, Jinyu Wang, Xiaotian Zhao, Shuyan Zang and Hailin Shen
Molecules 2024, 29(19), 4517; https://doi.org/10.3390/molecules29194517 - 24 Sep 2024
Abstract
Biochar prepared from crop straw is an economical method for adsorbing bromocresol green (BCG) from textile industrial wastewater. However, there is limited research on the adsorption mechanism of biochar for the removal of BCG. This study utilized cucumber straw as raw material to [...] Read more.
Biochar prepared from crop straw is an economical method for adsorbing bromocresol green (BCG) from textile industrial wastewater. However, there is limited research on the adsorption mechanism of biochar for the removal of BCG. This study utilized cucumber straw as raw material to prepare biochar with good adsorption potential and characterized its physicochemical properties. Through adsorption experiments, the effects of solution pH, biochar dosage, and initial dye concentration on adsorption performance were examined. The adsorption mechanism of cucumber straw biochar (CBC) for BCG was elucidated at the molecular level using adsorption kinetics, adsorption isotherm models, and density functional theory (DFT) calculations. Results show that the specific surface area of the CBC is 101.58 m2/g, and it has a high degree of carbonization, similar to the structure of graphite crystals. The presence of aromatic rings, –OH groups, and –COOH groups in CBC provides abundant adsorption sites for BCG. The adsorption process of CBC for BCG is influenced by both physical and chemical adsorption, and can be described by the Langmuir isotherm model, indicating a monolayer adsorption process. The theoretical maximum monolayer adsorption capacity (qm) of BCG at 298 K was calculated to be 99.18 mg/g. DFT calculations reveal interactions between BCG and CBC involving electrostatic interactions, van der Waals forces, halogen–π interactions, π–π interactions, and hydrogen bonds. Additionally, the interaction of hydrogen bonds between BCG and the –COOH group of biochar is stronger than that between BCG and the –OH group. These findings provide valuable insights into the preparation and application of efficient organic dye adsorbents. Full article
(This article belongs to the Section Green Chemistry)
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13 pages, 1145 KiB  
Article
On the Simulation of Photoreactions Using Restricted Open-Shell Kohn–Sham Theory
by Ralf Büchel, Luis Álvarez, Jan Grage, Dominykas Maniscalco and Irmgard Frank
Molecules 2024, 29(18), 4509; https://doi.org/10.3390/molecules29184509 - 23 Sep 2024
Abstract
It is a well-established standard to describe ground-state chemical reactions at an ab initio level of multi-electron theory. Fast reactions can be directly simulated. The most widely used approach is density functional theory for the electronic structure in combination with molecular dynamics for [...] Read more.
It is a well-established standard to describe ground-state chemical reactions at an ab initio level of multi-electron theory. Fast reactions can be directly simulated. The most widely used approach is density functional theory for the electronic structure in combination with molecular dynamics for the nuclear motion. This approach is known as ab initio molecular dynamics. In contrast, the simulation of excited-state reactions at this level of theory is significantly more difficult. It turns out that the self-consistent solution of the Kohn–Sham equations is not easily reached in excited-state simulations. The first program that solved this problem was the Car–Parrinello molecular dynamics code, using restricted open-shell Kohn–Sham theory. Meanwhile, there are alternatives, most prominently the Q-Chem code, which widens the range of applications. The present study investigates the suitability of both codes for the molecular dynamics simulation of excited-state motion and presents applications to photoreactions. Full article
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