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*[[ACS Award in Pure Chemistry]], 2010
*[[Sackler Prize]], 2009
*Novartis Lecturer,
*Hirata Gold Medal, 2007
*National Fresenius Award, 2007
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*[[Beckman Young Investigators Award]], 2006<ref>{{cite web |title=Phil S. Baran |url=http://www.beckman-foundation.org/beckman-young-investigators/phil-s-baran |website=Arnold and Mabel Beckman Foundation |accessdate=1 August 2018}}</ref>
*[[Sloan Fellowship|Alfred P. Sloan Foundation Fellow]], 2006–2008
*BMS Unrestricted "Freedom to Discover" Grant,
*NSF Career,
*Eli-Lilly Young Investigator Award,
*AstraZeneca Excellence in Chemistry Award, 2005
*DuPont Young Professor Award, 2005
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*GlaxoSmithKline Chemistry Scholar Award, 2005–2006
*Nobel Laureate Signature Award for Graduate Education in Chemistry, ACS, 2003
*National Institutes of Health Post-Doctoral Fellowship Award, Harvard,
*Hoffmann-La Roche Award for Excellence in Organic Chemistry, 2000
*Lesly Starr Shelton Award for Excellence in Chemistry Graduate Studies, 2000
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