SNAPC1: Difference between revisions
Appearance
Content deleted Content added
Updating to new gene infobox populated via wikidata |
Alter: doi-access. Added the cs1 style template to denote Vancouver ("vanc") citation style, because references contain "vauthors" attribute to specify the list of authors. |
||
(12 intermediate revisions by 10 users not shown) | |||
Line 1: | Line 1: | ||
{{Short description|Protein-coding gene in the species Homo sapiens}} |
|||
{{cs1 config|name-list-style=vanc}} |
|||
{{Infobox_gene}} |
{{Infobox_gene}} |
||
'''snRNA-activating protein complex subunit 1''' is a [[protein]] that in humans is encoded by the ''SNAPC1'' [[gene]].<ref name="pmid9644240">{{cite journal | |
'''snRNA-activating protein complex subunit 1''' is a [[protein]] that in humans is encoded by the ''SNAPC1'' [[gene]].<ref name="pmid9644240">{{cite journal |author1=Maeng JH |author2=Yoon JB | title = The human PTFgamma/SNAP43 gene: structure, chromosomal location, and identification of a VNTR in 5'-UTR | journal = J Biochem | volume = 124 | issue = 1 | pages = 23–7 |date=September 1998 | pmid = 9644240 | doi = 10.1093/oxfordjournals.jbchem.a022085}}</ref><ref name="entrez">{{cite web | title = Entrez Gene: SNAPC1 small nuclear RNA activating complex, polypeptide 1, 43kDa| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=6617}}</ref> |
||
<!-- The PBB_Summary template is automatically maintained by Protein Box Bot. See Template:PBB_Controls to Stop updates. --> |
|||
{{PBB Summary |
|||
| section_title = |
|||
| summary_text = |
|||
}} |
|||
==Interactions== |
==Interactions== |
||
SNAPC1 has been shown to [[Protein-protein interaction|interact]] with [[SNAPC4]],<ref name=pmid11056176>{{cite journal |last=Ma |first=B |
SNAPC1 has been shown to [[Protein-protein interaction|interact]] with [[SNAPC4]],<ref name=pmid11056176>{{cite journal |last=Ma |first=B |author2=Hernandez N |date=February 2001 |title=A map of protein-protein contacts within the small nuclear RNA-activating protein complex SNAPc |journal=J. Biol. Chem. |volume=276 |issue=7 |pages=5027–35 |location = United States| issn = 0021-9258| pmid = 11056176 |doi = 10.1074/jbc.M009301200 |doi-access= free}}</ref> [[SNAPC3]]<ref name=pmid11056176/><ref name=pmid9003788>{{cite journal |last=Henry |first=R W |author2=Ma B |author3=Sadowski C L |author4=Kobayashi R |author5=Hernandez N |date=Dec 1996 |title=Cloning and characterization of SNAP50, a subunit of the snRNA-activating protein complex SNAPc |journal=EMBO J. |volume=15 |issue=24 |pages=7129–36 |location = ENGLAND|doi=10.1002/j.1460-2075.1996.tb01104.x | issn = 0261-4189| pmid = 9003788 |pmc=452539 }}</ref> and [[Retinoblastoma protein]].<ref name=pmid11094070>{{cite journal |last=Hirsch |first=H A |author2=Gu L |author3=Henry R W |date=Dec 2000 |title=The Retinoblastoma Tumor Suppressor Protein Targets Distinct General Transcription Factors To Regulate RNA Polymerase III Gene Expression |journal=Mol. Cell. Biol. |volume=20 |issue=24 |pages=9182–91 |location = UNITED STATES| issn = 0270-7306| pmid = 11094070 |doi=10.1128/MCB.20.24.9182-9191.2000 |pmc=102176 }}</ref> |
||
==References== |
==References== |
||
Line 14: | Line 13: | ||
==Further reading== |
==Further reading== |
||
{{Refbegin | 2}} |
{{Refbegin | 2}} |
||
*{{cite journal |author1=Henry RW |author2=Sadowski CL |author3=Kobayashi R |author4=Hernandez N |title=A TBP-TAF complex required for transcription of human snRNA genes by RNA polymerase II and III |journal=Nature |volume=374 |issue= 6523 |pages= 653–6 |year= 1995 |pmid= 7715707 |doi= 10.1038/374653a0 |bibcode=1995Natur.374..653H |s2cid=4325527 }} |
|||
{{PBB_Further reading |
|||
*{{cite journal |author1=Yoon JB |author2=Roeder RG |title=Cloning of two proximal sequence element-binding transcription factor subunits (gamma and delta) that are required for transcription of small nuclear RNA genes by RNA polymerases II and III and interact with the TATA-binding protein |journal=Mol. Cell. Biol. |volume=16 |issue= 1 |pages= 1–9 |year= 1996 |pmid= 8524284 |doi=10.1016/S1569-2558(08)60061-2 | pmc=230972 | series=Advances in Molecular and Cell Biology | isbn=978-0-7623-0143-0 }} |
|||
| citations = |
|||
*{{cite journal | |
*{{cite journal |vauthors=Henry RW, Ma B, Sadowski CL, etal |title=Cloning and characterization of SNAP50, a subunit of the snRNA-activating protein complex SNAPc |journal=EMBO J. |volume=15 |issue= 24 |pages= 7129–36 |year= 1997 |doi=10.1002/j.1460-2075.1996.tb01104.x |pmid= 9003788 | pmc=452539 }} |
||
*{{cite journal | |
*{{cite journal |author1=Ma B |author2=Hernandez N |title=A map of protein-protein contacts within the small nuclear RNA-activating protein complex SNAPc |journal=J. Biol. Chem. |volume=276 |issue= 7 |pages= 5027–35 |year= 2001 |pmid= 11056176 |doi= 10.1074/jbc.M009301200 |doi-access= free}} |
||
*{{cite journal |
*{{cite journal |author1=Hirsch HA |author2=Gu L |author3=Henry RW |title=The Retinoblastoma Tumor Suppressor Protein Targets Distinct General Transcription Factors To Regulate RNA Polymerase III Gene Expression |journal=Mol. Cell. Biol. |volume=20 |issue= 24 |pages= 9182–91 |year= 2001 |pmid= 11094070 |doi=10.1128/MCB.20.24.9182-9191.2000 | pmc=102176 }} |
||
*{{cite journal |
*{{cite journal |vauthors=Strausberg RL, Feingold EA, Grouse LH, etal |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 | pmc=139241 |bibcode=2002PNAS...9916899M |doi-access=free }} |
||
*{{cite journal |
*{{cite journal |vauthors=Hinkley CS, Hirsch HA, Gu L, etal |title=The small nuclear RNA-activating protein 190 Myb DNA binding domain stimulates TATA box-binding protein-TATA box recognition |journal=J. Biol. Chem. |volume=278 |issue= 20 |pages= 18649–57 |year= 2003 |pmid= 12621023 |doi= 10.1074/jbc.M204247200 |doi-access= free }} |
||
*{{cite journal |vauthors=Strausberg RL, Feingold EA, Grouse LH, etal |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 | pmc=139241 }} |
|||
*{{cite journal |vauthors=Hinkley CS, Hirsch HA, Gu L, etal |title=The small nuclear RNA-activating protein 190 Myb DNA binding domain stimulates TATA box-binding protein-TATA box recognition |journal=J. Biol. Chem. |volume=278 |issue= 20 |pages= 18649–57 |year= 2003 |pmid= 12621023 |doi= 10.1074/jbc.M204247200 }} |
|||
*{{cite journal |vauthors=Gerhard DS, Wagner L, Feingold EA, etal |title=The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC) |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121–7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 | pmc=528928 }} |
*{{cite journal |vauthors=Gerhard DS, Wagner L, Feingold EA, etal |title=The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC) |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121–7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 | pmc=528928 }} |
||
*{{cite journal | |
*{{cite journal |author1=Gu L |author2=Esselman WJ |author3=Henry RW |title=Cooperation between small nuclear RNA-activating protein complex (SNAPC) and TATA-box-binding protein antagonizes protein kinase CK2 inhibition of DNA binding by SNAPC |journal=J. Biol. Chem. |volume=280 |issue= 30 |pages= 27697–704 |year= 2005 |pmid= 15955816 |doi= 10.1074/jbc.M503206200 |doi-access=free }} |
||
*{{cite journal |vauthors=Rual JF, Venkatesan K, Hao T, etal |title=Towards a proteome-scale map of the human protein-protein interaction network |journal=Nature |volume=437 |issue= 7062 |pages= 1173–8 |year= 2005 |pmid= 16189514 |doi= 10.1038/nature04209 }} |
*{{cite journal |vauthors=Rual JF, Venkatesan K, Hao T, etal |title=Towards a proteome-scale map of the human protein-protein interaction network |journal=Nature |volume=437 |issue= 7062 |pages= 1173–8 |year= 2005 |pmid= 16189514 |doi= 10.1038/nature04209 |bibcode=2005Natur.437.1173R |s2cid=4427026 }} |
||
}} |
|||
{{Refend}} |
{{Refend}} |
||
<!-- The PBB_Controls template provides controls for Protein Box Bot, please see Template:PBB_Controls for details. --> |
|||
{{PBB Controls |
|||
| update_page = yes |
|||
| require_manual_inspection = no |
|||
| update_protein_box = yes |
|||
| update_summary = yes |
|||
| update_citations = yes |
|||
}} |
|||
Latest revision as of 07:27, 7 January 2024
SNAPC1 | |||||||||||||||||||||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Identifiers | |||||||||||||||||||||||||||||||||||||||||||||||||||
Aliases | SNAPC1, PTFgamma, SNAP43, small nuclear RNA activating complex polypeptide 1 | ||||||||||||||||||||||||||||||||||||||||||||||||||
External IDs | OMIM: 600591; MGI: 1922877; HomoloGene: 2317; GeneCards: SNAPC1; OMA:SNAPC1 - orthologs | ||||||||||||||||||||||||||||||||||||||||||||||||||
| |||||||||||||||||||||||||||||||||||||||||||||||||||
| |||||||||||||||||||||||||||||||||||||||||||||||||||
| |||||||||||||||||||||||||||||||||||||||||||||||||||
| |||||||||||||||||||||||||||||||||||||||||||||||||||
| |||||||||||||||||||||||||||||||||||||||||||||||||||
Wikidata | |||||||||||||||||||||||||||||||||||||||||||||||||||
|
snRNA-activating protein complex subunit 1 is a protein that in humans is encoded by the SNAPC1 gene.[5][6]
Interactions
[edit]SNAPC1 has been shown to interact with SNAPC4,[7] SNAPC3[7][8] and Retinoblastoma protein.[9]
References
[edit]- ^ a b c GRCh38: Ensembl release 89: ENSG00000023608 – Ensembl, May 2017
- ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000021113 – Ensembl, May 2017
- ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
- ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
- ^ Maeng JH, Yoon JB (September 1998). "The human PTFgamma/SNAP43 gene: structure, chromosomal location, and identification of a VNTR in 5'-UTR". J Biochem. 124 (1): 23–7. doi:10.1093/oxfordjournals.jbchem.a022085. PMID 9644240.
- ^ "Entrez Gene: SNAPC1 small nuclear RNA activating complex, polypeptide 1, 43kDa".
- ^ a b Ma B, Hernandez N (February 2001). "A map of protein-protein contacts within the small nuclear RNA-activating protein complex SNAPc". J. Biol. Chem. 276 (7). United States: 5027–35. doi:10.1074/jbc.M009301200. ISSN 0021-9258. PMID 11056176.
- ^ Henry RW, Ma B, Sadowski C L, Kobayashi R, Hernandez N (Dec 1996). "Cloning and characterization of SNAP50, a subunit of the snRNA-activating protein complex SNAPc". EMBO J. 15 (24). ENGLAND: 7129–36. doi:10.1002/j.1460-2075.1996.tb01104.x. ISSN 0261-4189. PMC 452539. PMID 9003788.
- ^ Hirsch HA, Gu L, Henry R W (Dec 2000). "The Retinoblastoma Tumor Suppressor Protein Targets Distinct General Transcription Factors To Regulate RNA Polymerase III Gene Expression". Mol. Cell. Biol. 20 (24). UNITED STATES: 9182–91. doi:10.1128/MCB.20.24.9182-9191.2000. ISSN 0270-7306. PMC 102176. PMID 11094070.
Further reading
[edit]- Henry RW, Sadowski CL, Kobayashi R, Hernandez N (1995). "A TBP-TAF complex required for transcription of human snRNA genes by RNA polymerase II and III". Nature. 374 (6523): 653–6. Bibcode:1995Natur.374..653H. doi:10.1038/374653a0. PMID 7715707. S2CID 4325527.
- Yoon JB, Roeder RG (1996). "Cloning of two proximal sequence element-binding transcription factor subunits (gamma and delta) that are required for transcription of small nuclear RNA genes by RNA polymerases II and III and interact with the TATA-binding protein". Mol. Cell. Biol. Advances in Molecular and Cell Biology. 16 (1): 1–9. doi:10.1016/S1569-2558(08)60061-2. ISBN 978-0-7623-0143-0. PMC 230972. PMID 8524284.
- Henry RW, Ma B, Sadowski CL, et al. (1997). "Cloning and characterization of SNAP50, a subunit of the snRNA-activating protein complex SNAPc". EMBO J. 15 (24): 7129–36. doi:10.1002/j.1460-2075.1996.tb01104.x. PMC 452539. PMID 9003788.
- Ma B, Hernandez N (2001). "A map of protein-protein contacts within the small nuclear RNA-activating protein complex SNAPc". J. Biol. Chem. 276 (7): 5027–35. doi:10.1074/jbc.M009301200. PMID 11056176.
- Hirsch HA, Gu L, Henry RW (2001). "The Retinoblastoma Tumor Suppressor Protein Targets Distinct General Transcription Factors To Regulate RNA Polymerase III Gene Expression". Mol. Cell. Biol. 20 (24): 9182–91. doi:10.1128/MCB.20.24.9182-9191.2000. PMC 102176. PMID 11094070.
- Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
- Hinkley CS, Hirsch HA, Gu L, et al. (2003). "The small nuclear RNA-activating protein 190 Myb DNA binding domain stimulates TATA box-binding protein-TATA box recognition". J. Biol. Chem. 278 (20): 18649–57. doi:10.1074/jbc.M204247200. PMID 12621023.
- Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
- Gu L, Esselman WJ, Henry RW (2005). "Cooperation between small nuclear RNA-activating protein complex (SNAPC) and TATA-box-binding protein antagonizes protein kinase CK2 inhibition of DNA binding by SNAPC". J. Biol. Chem. 280 (30): 27697–704. doi:10.1074/jbc.M503206200. PMID 15955816.
- Rual JF, Venkatesan K, Hao T, et al. (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. Bibcode:2005Natur.437.1173R. doi:10.1038/nature04209. PMID 16189514. S2CID 4427026.