SALL3: Difference between revisions

SALL3
Identifiers
Aliases	SALL3, ZNF796, spalt-like transcription factor 3, spalt like transcription factor 3
External IDs	OMIM: 605079; MGI: 109295; HomoloGene: 18142; GeneCards: SALL3; OMA:SALL3 - orthologs
Gene location (Human)
Chr.	Chromosome 18 (human)
End	79,002,677 bp
Gene location (Mouse)
Chr.	Chromosome 18 (mouse)
End	81,029,986 bp
RNA expression pattern
	Top expressed in
	ventricular zone; ; ganglionic eminence; ; amygdala; ; C1 segment; ; caudate nucleus; ; nucleus accumbens; ; putamen; ; hypothalamus; ; substantia nigra; ; testicle;
	Top expressed in
	Rostral migratory stream; ; tail of embryo; ; Bowman's capsule; ; epiblast; ; ventricular zone; ; genital tubercle; ; primitive streak; ; olfactory bulb; ; perirhinal cortex; ; embryo;
	More reference expression data
	n/a
Gene ontology
Molecular function	DNA-binding transcription factor activity; sequence-specific DNA binding; DNA binding; metal ion binding; nucleic acid binding; DNA-binding transcription factor activity, RNA polymerase II-specific;
Cellular component	nucleus;
Biological process	forelimb morphogenesis; neurogenesis; regulation of transcription, DNA-templated; negative regulation of smoothened signaling pathway; transcription by RNA polymerase II; olfactory bulb interneuron development; hindlimb morphogenesis; signal transduction; transcription, DNA-templated; regulation of transcription by RNA polymerase II;
	Sources:Amigo / QuickGO
Orthologs
	27164
	20689
	ENSG00000256463
	ENSMUSG00000024565
	Q9BXA9
	Q62255
	NM_171999
	NM_178280; NM_001369133
	NP_741996
	NP_840064; NP_001356062
	Wikidata
View/Edit Human	View/Edit Mouse

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Latest revision as of 12:14, 19 January 2024

Sal-like protein 3, also known as zinc finger protein SALL3, is a protein that in humans in encoded by the SALL3 gene.^[5]^[6]

References

^ ^a ^b ^c GRCh38: Ensembl release 89: ENSG00000256463 – Ensembl, May 2017
^ ^a ^b ^c GRCm38: Ensembl release 89: ENSMUSG00000024565 – Ensembl, May 2017
^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ "Entrez Gene: sal-like 3 (Drosophila)".
^ Kohlhase J, Hausmann S, Stojmenovic G, Dixkens C, Bink K, Schulz-Schaeffer W, Altmann M, Engel W (December 1999). "SALL3, a new member of the human spalt-like gene family, maps to 18q23". Genomics. 62 (2): 216–22. doi:10.1006/geno.1999.6005. PMID 10610715.

Sweetman D, Münsterberg A (2006). "The vertebrate spalt genes in development and disease" (PDF). Dev. Biol. 293 (2): 285–93. doi:10.1016/j.ydbio.2006.02.009. PMID 16545361. S2CID 45268563.
Strausberg RL, Feingold EA, Grouse LH, et al. (2002). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
Shikauchi Y, Saiura A, Kubo T, et al. (2009). "SALL3 interacts with DNMT3A and shows the ability to inhibit CpG island methylation in hepatocellular carcinoma". Mol. Cell. Biol. 29 (7): 1944–58. doi:10.1128/MCB.00840-08. PMC 2655625. PMID 19139273.
Julií A, Ballina J, Caí±ete JD, et al. (2008). "Genome-wide association study of rheumatoid arthritis in the Spanish population: KLF12 as a risk locus for rheumatoid arthritis susceptibility". Arthritis Rheum. 58 (8): 2275–86. doi:10.1002/art.23623. hdl:10553/50124. PMID 18668548.
Barbe L, Lundberg E, Oksvold P, et al. (2008). "Toward a confocal subcellular atlas of the human proteome". Mol. Cell. Proteomics. 7 (3): 499–508. doi:10.1074/mcp.M700325-MCP200. PMID 18029348.
Jugessur A, Shi M, Gjessing HK, et al. (2010). "Maternal genes and facial clefts in offspring: a comprehensive search for genetic associations in two population-based cleft studies from Scandinavia". PLOS ONE. 5 (7): e11493. Bibcode:2010PLoSO...511493J. doi:10.1371/journal.pone.0011493. PMC 2901336. PMID 20634891.
de Celis JF, Barrio R (2009). "Regulation and function of Spalt proteins during animal development". Int. J. Dev. Biol. 53 (8–10): 1385–98. doi:10.1387/ijdb.072408jd. hdl:10261/37592. PMID 19247946.

This article on a gene on human chromosome 18 is a stub. You can help Wikipedia by expanding it.

[refGRCh38Ensembl-1] GRCh38: Ensembl release 89: ENSG00000256463 – Ensembl, May 2017

[refGRCm38Ensembl-2] GRCm38: Ensembl release 89: ENSMUSG00000024565 – Ensembl, May 2017

[3] "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[4] "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[entrez-5] "Entrez Gene: sal-like 3 (Drosophila)".

[pmid10610715-6] Kohlhase J, Hausmann S, Stojmenovic G, Dixkens C, Bink K, Schulz-Schaeffer W, Altmann M, Engel W (December 1999). "SALL3, a new member of the human spalt-like gene family, maps to 18q23". Genomics. 62 (2): 216–22. doi:10.1006/geno.1999.6005. PMID 10610715.

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@@ Line 1: / Line 1: @@
+{{Short description|Protein-coding gene in the species Homo sapiens}}
-{{Underlinked|date=June 2016}}
+{{cs1 config|name-list-style=vanc}}
 {{Infobox_gene}}
-'''Sal-like protein 3''', also known as '''zinc finger protein SALL3''', is a [[protein]] that in humans in encoded by the ''SALL3'' [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: sal-like 3 (Drosophila)| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=27164| accessdate = }}</ref><ref name="pmid10610715">{{cite journal |vauthors=Kohlhase J, Hausmann S, Stojmenovic G, Dixkens C, Bink K, Schulz-Schaeffer W, Altmann M, Engel W | title = SALL3, a new member of the human spalt-like gene family, maps to 18q23 | journal = Genomics | volume = 62 | issue = 2 | pages = 216–22 |date=December 1999 | pmid = 10610715 | doi = 10.1006/geno.1999.6005 | url = | issn = }}</ref>
+'''Sal-like protein 3''', also known as '''zinc finger protein SALL3''', is a [[protein]] that in humans in encoded by the ''SALL3'' [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: sal-like 3 (Drosophila)| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=27164}}</ref><ref name="pmid10610715">{{cite journal |vauthors=Kohlhase J, Hausmann S, Stojmenovic G, Dixkens C, Bink K, Schulz-Schaeffer W, Altmann M, Engel W | title = SALL3, a new member of the human spalt-like gene family, maps to 18q23 | journal = Genomics | volume = 62 | issue = 2 | pages = 216–22 |date=December 1999 | pmid = 10610715 | doi = 10.1006/geno.1999.6005 }}</ref>
 ==References==
@@ Line 8: / Line 9: @@
 ==Further reading==
 {{refbegin|35em}}
-*{{cite journal  |vauthors=Sweetman D, Münsterberg A |title=The vertebrate spalt genes in development and disease. |journal=Dev. Biol. |volume=293 |issue= 2 |pages= 285–93 |year= 2006 |pmid= 16545361 |doi= 10.1016/j.ydbio.2006.02.009 }}
+*{{cite journal  |vauthors=Sweetman D, Münsterberg A |title=The vertebrate spalt genes in development and disease. |journal=Dev. Biol. |volume=293 |issue= 2 |pages= 285–93 |year= 2006 |pmid= 16545361 |doi= 10.1016/j.ydbio.2006.02.009 |s2cid=45268563 |url=https://ueaeprints.uea.ac.uk/id/eprint/1181/1/06_Sweetman_DevBiol_review.pdf }}
-*{{cite journal   |vauthors=Strausberg RL, Feingold EA, Grouse LH, etal |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2002 |pmid= 12477932 |doi= 10.1073/pnas.242603899 |pmc=139241}}
+*{{cite journal   |vauthors=Strausberg RL, Feingold EA, Grouse LH, etal |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2002 |pmid= 12477932 |doi= 10.1073/pnas.242603899 |pmc=139241|bibcode=2002PNAS...9916899M |doi-access=free }}
 *{{cite journal   |vauthors=Shikauchi Y, Saiura A, Kubo T, etal |title=SALL3 interacts with DNMT3A and shows the ability to inhibit CpG island methylation in hepatocellular carcinoma. |journal=Mol. Cell. Biol. |volume=29 |issue= 7 |pages= 1944–58 |year= 2009 |pmid= 19139273 |doi= 10.1128/MCB.00840-08 |pmc=2655625}}
-*{{cite journal  |author1=Julií  A |author2=Ballina J |author3=Caí±ete JD |title=Genome-wide association study of rheumatoid arthritis in the Spanish population: KLF12 as a risk locus for rheumatoid arthritis susceptibility. |journal=Arthritis Rheum. |volume=58 |issue= 8 |pages= 2275–86 |year= 2008 |pmid= 18668548 |doi= 10.1002/art.23623 |display-authors=etal}}
+*{{cite journal  |author1=Julií A |author2=Ballina J |author3=Caí±ete JD |title=Genome-wide association study of rheumatoid arthritis in the Spanish population: KLF12 as a risk locus for rheumatoid arthritis susceptibility. |journal=Arthritis Rheum. |volume=58 |issue= 8 |pages= 2275–86 |year= 2008 |pmid= 18668548 |doi= 10.1002/art.23623 |display-authors=etal|doi-access=free |hdl=10553/50124 |hdl-access=free }}
-*{{cite journal   |vauthors=Barbe L, Lundberg E, Oksvold P, etal |title=Toward a confocal subcellular atlas of the human proteome. |journal=Mol. Cell. Proteomics |volume=7 |issue= 3 |pages= 499–508 |year= 2008 |pmid= 18029348 |doi= 10.1074/mcp.M700325-MCP200 }}
+*{{cite journal   |vauthors=Barbe L, Lundberg E, Oksvold P, etal |title=Toward a confocal subcellular atlas of the human proteome. |journal=Mol. Cell. Proteomics |volume=7 |issue= 3 |pages= 499–508 |year= 2008 |pmid= 18029348 |doi= 10.1074/mcp.M700325-MCP200 |doi-access= free }}
-*{{cite journal   |vauthors=Jugessur A, Shi M, Gjessing HK, etal |title=Maternal genes and facial clefts in offspring: a comprehensive search for genetic associations in two population-based cleft studies from Scandinavia. |journal=PLoS ONE |volume=5 |issue= 7 |pages= e11493 |year= 2010 |pmid= 20634891 |doi= 10.1371/journal.pone.0011493 |pmc=2901336}}
+*{{cite journal   |vauthors=Jugessur A, Shi M, Gjessing HK, etal |title=Maternal genes and facial clefts in offspring: a comprehensive search for genetic associations in two population-based cleft studies from Scandinavia. |journal=PLOS ONE |volume=5 |issue= 7 |pages= e11493 |year= 2010 |pmid= 20634891 |doi= 10.1371/journal.pone.0011493 |pmc=2901336|bibcode=2010PLoSO...511493J |doi-access=free }}
-*{{cite journal  |vauthors=de Celis JF, Barrio R |title=Regulation and function of Spalt proteins during animal development. |journal=Int. J. Dev. Biol. |volume=53 |issue= 8-10 |pages= 1385–98 |year= 2009 |pmid= 19247946 |doi= 10.1387/ijdb.072408jd }}
+*{{cite journal  |vauthors=de Celis JF, Barrio R |title=Regulation and function of Spalt proteins during animal development. |journal=Int. J. Dev. Biol. |volume=53 |issue= 8–10 |pages= 1385–98 |year= 2009 |pmid= 19247946 |doi= 10.1387/ijdb.072408jd |doi-access= free |hdl= 10261/37592 |hdl-access= free }}
 {{refend}}