2020–2024 H5N1 outbreak: Difference between revisions
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{{Short description|Global outbreak of avian flu H5N1 in 2020–2024}} |
{{Short description|Global outbreak of avian flu H5N1 in 2020–2024}} |
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Since 2020, [[Global spread of H5N1| |
Since 2020, [[Global spread of H5N1|outbreaks]] of [[avian influenza]] [[Influenza A virus subtype H5N1|subtype H5N1]] have been occurring, with cases reported from every continent as of May 2024.<ref name=":0">{{Cite web |date=2023-02-24 |title=Highlights in the History of Avian Influenza (Bird Flu) Timeline – 2020-2023 {{!}} Avian Influenza (Flu) |url=https://www.cdc.gov/flu/avianflu/timeline/avian-timeline-2020s.htm |access-date=2023-02-24 |website=www.cdc.gov |language=en-us |archive-date=2023-02-25 |archive-url=https://web.archive.org/web/20230225001043/https://www.cdc.gov/flu/avianflu/timeline/avian-timeline-2020s.htm |url-status=live }}</ref><ref>{{Cite news |date=2023-02-16 |title=A global bird flu outbreak is now so bad, many countries are considering vaccination |language=en-AU |work=ABC News |url=https://www.abc.net.au/news/science/2023-02-17/bird-flu-h5n1-global-pandemic-poultry-vaccination-wild-animals/101972756 |access-date=2023-02-24 |archive-date=2023-02-23 |archive-url=https://web.archive.org/web/20230223185644/https://www.abc.net.au/news/science/2023-02-17/bird-flu-h5n1-global-pandemic-poultry-vaccination-wild-animals/101972756 |url-status=live }}</ref><ref>{{Cite web |last1=Worden-Sapper |first1=Emma |last2=Sawyer |first2=Sara |last3=Wu |first3=Sharon |title=As bird flu continues to spread in the US and worldwide, what's the risk that it could start a human pandemic? 4 questions answered |url=http://theconversation.com/as-bird-flu-continues-to-spread-in-the-us-and-worldwide-whats-the-risk-that-it-could-start-a-human-pandemic-4-questions-answered-200204 |access-date=2023-03-30 |website=The Conversation |date=16 March 2023 |language=en |archive-date=2023-03-30 |archive-url=https://web.archive.org/web/20230330010615/http://theconversation.com/as-bird-flu-continues-to-spread-in-the-us-and-worldwide-whats-the-risk-that-it-could-start-a-human-pandemic-4-questions-answered-200204 |url-status=live }}</ref><ref>{{Cite web |last=Docter-Loeb |first=Hannah |title=Vaccine Makers Are Preparing for Bird Flu |url=https://www.scientificamerican.com/article/vaccine-makers-are-preparing-for-bird-flu/ |access-date=2023-03-30 |website=Scientific American |language=en |archive-date=2023-03-30 |archive-url=https://web.archive.org/web/20230330130821/https://www.scientificamerican.com/article/vaccine-makers-are-preparing-for-bird-flu/ |url-status=live }}</ref> Some species of wild [[Water bird|aquatic birds]] act as natural [[Asymptomatic carrier|asymptomatic carriers]] of a large variety of influenza A viruses, which can infect poultry, other bird species, mammals and humans if they come into close contact with infected feces or contaminated material, or by eating infected birds.<ref>{{Cite web |date=2022-12-13 |title=Bird flu (avian influenza): how to spot and report it in poultry or other captive birds |url=https://www.gov.uk/guidance/avian-influenza-bird-flu |access-date=2024-05-06 |website=Department for Environment, Food & Rural Affairs and Animal and Plant Health Agency |language=en}}</ref> In late 2023, H5N1 was discovered in the [[Antarctic]] for the first time, raising fears of imminent spread throughout the region, potentially leading to a "catastrophic breeding failure" among animals that had not previously been exposed to avian influenza viruses.<ref>{{cite news |last1=Weston |first1=Phoebe |title='Catastrophic': bird flu reaches Antarctic for the first time |url=https://www.theguardian.com/environment/2023/oct/24/catastrophic-penguins-and-seals-at-risk-as-bird-flu-reaches-antarctic-aoe |access-date=30 October 2023 |work=The Guardian |date=24 October 2023 |archive-url=https://web.archive.org/web/20231029163752/https://www.theguardian.com/environment/2023/oct/24/catastrophic-penguins-and-seals-at-risk-as-bird-flu-reaches-antarctic-aoe |archive-date=29 October 2023}}</ref> The main virus involved in the global outbreak is classified as H5N1 clade 2.3.4.4b, however genetic diversification with other clades such as 2.3.2.1c has seen the virus evolve in ability to cause significant outbreaks in a broader range of species including mammals.<ref name=Kerlin24>{{cite web |last1=Kerlin |first1=Katherine E. |title=Avian Influenza Virus Is Adapting to Spread to Marine Mammals |url=https://www.ucdavis.edu/climate/news/avian-influenza-virus-adapting-spread-marine-mammals |website=UC Davis |language=en |date=28 February 2024 |access-date=10 March 2024 |archive-date=10 March 2024 |archive-url=https://web.archive.org/web/20240310050947/https://www.ucdavis.edu/climate/news/avian-influenza-virus-adapting-spread-marine-mammals |url-status=live }}</ref><ref name=cdc-graphic>{{cite web |title=Emergence and Evolution of H5N1 Bird Flu {{!}} Avian Influenza (Flu) |url=https://www.cdc.gov/flu/avianflu/communication-resources/bird-flu-origin-infographic.html |website=www.cdc.gov |language=en-us |date=6 June 2023 |access-date=10 March 2024 |archive-date=7 March 2024 |archive-url=https://web.archive.org/web/20240307155551/https://www.cdc.gov/flu/avianflu/communication-resources/bird-flu-origin-infographic.html |url-status=live }}</ref><ref>{{cite news |last1=Schnirring |first1=Lisa |title=H5N1 avian flu infects Colorado dairy cows as global experts weigh in on virus changes |url=https://www.cidrap.umn.edu/avian-influenza-bird-flu/h5n1-avian-flu-infects-colorado-dairy-cows-global-experts-weigh-virus |access-date=28 April 2024 |agency=CIDRAP |publisher=University of Minnesota |date=27 April 2024 |archive-date=28 April 2024 |archive-url=https://web.archive.org/web/20240428083427/https://www.cidrap.umn.edu/avian-influenza-bird-flu/h5n1-avian-flu-infects-colorado-dairy-cows-global-experts-weigh-virus |url-status=live }}</ref> |
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H5N6 and H5N8 viruses with the H5-2.3.4.4b [[Hemagglutinin (influenza)|hemagglutinin]] (HA) gene became prominent globally in 2018–2020.<ref name="cdc-graphic" /><ref>{{Cite journal |last1=Tian |first1=Jingman |last2=Bai |first2=Xiaoli |last3=Li |first3=Minghui |last4=Zeng |first4=Xianying |last5=Xu |first5=Jia |last6=Li |first6=Peng |last7=Wang |first7=Miao |last8=Song |first8=Xingdong |last9=Zhao |first9=Zhiguo |last10=Tian |first10=Guobin |last11=Liu |first11=Liling |last12=Guan |first12=Yuntao |last13=Li |first13=Yanbing |last14=Chen |first14=Hualan |date=July 2023 |title=Highly Pathogenic Avian Influenza Virus (H5N1) Clade 2.3.4.4b Introduced by Wild Birds, China, 2021 |journal=Emerging Infectious Diseases |volume=29 |issue=7 |pages=1367–1375 |doi=10.3201/eid2907.221149 |issn=1080-6040 |pmid=37347504|pmc=10310395 }}</ref> In 2020, [[reassortment]] (genetic "swapping") between these H5-2.3.4.4b viruses and other [[Strain (biology)|strains]] of avian influenza led to the emergence of a H5N1 strain with a H5-2.3.4.4b gene.<ref name="cdc-graphic" /> The virus then spread across Europe, detected there in [[autumn]], before spreading to [[Africa]] and [[Asia]].<ref name=":0" /> It continues to swap genes with local flu viruses as it travels the globe.<ref name="Tian2023" />{{rp|at=(fig.1)}} |
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== Timeline == |
== Timeline == |
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[[File:H5N1 globe 2023.svg|thumb|400px| |
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! colspan="2" align="center" | Highly pathogenic H5N1 |
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| colspan="2" | [[Image:Global spread of H5N1 map.PNG|center|450px|Highly pathogenic H5N1]] |
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=== 2020 and prior === |
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[[File:Formation of the index H5N1 virus bearing the 2.3.4.4b HA gene in 2020.png|thumb|Formation of the index H5N1 virus bearing the 2.3.4.4b HA gene in 2020. The eight bars represent the eight gene segments (from top to bottom: PB2, PB1, PA, HA, NP, NA, M, and NS), and the colour of the bar indicates the closest donor strain of the gene segment.<ref name=":1">{{Cite journal |last1=Shi |first1=Jianzhong |last2=Zeng |first2=Xianying |last3=Cui |first3=Pengfei |last4=Yan |first4=Cheng |last5=Chen |first5=Hualan |date=2023-12-31 |title=Alarming situation of emerging H5 and H7 avian influenza and effective control strategies |journal=Emerging Microbes & Infections |language=en |volume=12 |issue=1 |doi=10.1080/22221751.2022.2155072 |issn=2222-1751 |pmc=9754034 |pmid=36458831}}</ref>]] |
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{{See also|Influenza A virus#Structure and genetics}} |
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Genetic reassortment of several influenza A strains culminates in the emergence of a highly pathogenic H5N1 subtype bearing the clade 2.3.4.4b hemagglutinin (HA) gene.<ref>{{Cite web |date=22 May 2024 |title=Genetic and antigenic characteristics of clade 2.3.4.4b A(H5N1) viruses identified in dairy cattle in the United States of America |url=https://www.who.int/publications/m/item/genetic-and-antigenic-characteristics-of-clade-2.3.4.4b-a(h5n1)-viruses-identified-in-dairy-cattle-in-the-united-states-of-america |website=World Health Organization}}</ref><ref name=":1" /> |
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H5N6 and H5N8 viruses with the H5-2.3.4.4b hemagglutinin (HA) gene became prominent globally among [[poultry]] in 2018–2020.<ref name=cdc-graphic/> In 2020, [[reassortment]] (genetic "swapping") between these H5-2.3.4.4b poultry viruses and N1 wild bird viruses led to the emergence of a H5N1 with a H5-2.3.4.4b gene. The virus then spread across Europe, detected there in [[autumn]], before spreading to [[Africa]] and [[Asia]].<ref name=":0" /> It continues to swap genes with local flu viruses as it travels the globe.<ref name=Tian2023/>{{rp|at=(fig.1)}} |
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=== 2021 === |
=== 2021 === |
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=== 2024 === |
=== 2024 === |
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==== Southeast Asia ==== |
==== Southeast Asia ==== |
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A cluster of five human infections of H5N1 occurred in Cambodia in late January and early February. All patients had recent contact with sick poultry. One patient died. Sequencing of two of the patients indicate that they were infected by clade 2.3.2.1c, which is not the same same as the 2.3.4.4b clade virus that is causing global outbreaks in the US and beyond.<ref>{{cite web |title=First Human Influenza A(H5N1) (Bird Flu) Virus Infections in Cambodia |url=https://www.cdc.gov/flu/avianflu/spotlights/2023-2024/cambodia-human-reported-2024.htm |website=Centers for Disease Control and Prevention |language=en-us |date=12 February 2024 |access-date=10 March 2024 |archive-date=10 March 2024 |archive-url=https://web.archive.org/web/20240310051930/https://www.cdc.gov/flu/avianflu/spotlights/2023-2024/cambodia-human-reported-2024.htm |url-status=live }}</ref> A person in [[Vietnam]] died of H5N1 infection around the same time.<ref>{{Cite web |last= |date=2024-04-04 |title=Vietnam confirms H5N1 in man's avian flu death |url=https://www.cidrap.umn.edu/avian-influenza-bird-flu/vietnam-confirms-h5n1-mans-avian-flu-death |access-date=2024-04-04 |website=CIDRAP |language=en |archive-date=2024-04-03 |archive-url=https://web.archive.org/web/20240403035847/https://www.cidrap.umn.edu/avian-influenza-bird-flu/vietnam-confirms-h5n1-mans-avian-flu-death |url-status=live }}</ref> It remains unreported which clade of H5 virus the patient in Vietnam was infected by. However, an April 2024 statement from the FAO reports that recent (~2023) reassortment in the [[Greater Mekong Subregion]] has produced viruses that carry internal genes from the new 2.3.4.4b virus but the H5 gene from the old 2.3.2.1c lineage. The FAO also states that the new type of virus is |
A cluster of five human infections of H5N1 occurred in Cambodia in late January and early February. All patients had recent contact with sick poultry. One patient died. Sequencing of two of the patients indicate that they were infected by clade 2.3.2.1c, which is not the same same as the 2.3.4.4b clade virus that is causing global outbreaks in the US and beyond.<ref>{{cite web |title=First Human Influenza A(H5N1) (Bird Flu) Virus Infections in Cambodia |url=https://www.cdc.gov/flu/avianflu/spotlights/2023-2024/cambodia-human-reported-2024.htm |website=Centers for Disease Control and Prevention |language=en-us |date=12 February 2024 |access-date=10 March 2024 |archive-date=10 March 2024 |archive-url=https://web.archive.org/web/20240310051930/https://www.cdc.gov/flu/avianflu/spotlights/2023-2024/cambodia-human-reported-2024.htm |url-status=live }}</ref> A person in [[Vietnam]] died of H5N1 infection around the same time.<ref>{{Cite web |last= |date=2024-04-04 |title=Vietnam confirms H5N1 in man's avian flu death |url=https://www.cidrap.umn.edu/avian-influenza-bird-flu/vietnam-confirms-h5n1-mans-avian-flu-death |access-date=2024-04-04 |website=CIDRAP |language=en |archive-date=2024-04-03 |archive-url=https://web.archive.org/web/20240403035847/https://www.cidrap.umn.edu/avian-influenza-bird-flu/vietnam-confirms-h5n1-mans-avian-flu-death |url-status=live }}</ref> It remains unreported which clade of H5 virus the patient in Vietnam was infected by. However, an April 2024 statement from the FAO reports that recent (~2023) reassortment in the [[Greater Mekong Subregion]] has produced viruses that carry internal genes from the new 2.3.4.4b virus but the H5 gene from the old 2.3.2.1c lineage. The FAO also states that the new type of virus is implicated in human cases, but it does not specify which.<ref>{{cite web |title=Officials warn of H5N1 avian flu reassortant circulating in parts of Asia {{!}} CIDRAP |url=https://www.cidrap.umn.edu/avian-influenza-bird-flu/officials-warn-h5n1-avian-flu-reassortant-circulating-parts-asia |website=www.cidrap.umn.edu |language=en |date=5 April 2024 |access-date=9 April 2024 |archive-date=9 April 2024 |archive-url=https://web.archive.org/web/20240409000936/https://www.cidrap.umn.edu/avian-influenza-bird-flu/officials-warn-h5n1-avian-flu-reassortant-circulating-parts-asia |url-status=live }}</ref> |
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On April 5, the Philippines reported a H5N1 outbreak on a poultry farm in [[Leyte]], which killed 4,475 birds. Earlier in the year, the Philippines Department of Agriculture temporarily banned poultry exports from several countries including Japan, Belgium, and France.<ref>{{Cite web |last= |date=2024-04-05 |title=Philippines reports H5N1 bird flu outbreak on poultry farm |url=https://www.gmanetwork.com/news/topstories/nation/902707/philippines-reports-h5n1-bird-flu-outbreak-on-poultry-farm/story/ |access-date=2024-04-04 |website=[[GMA Integrated News|GMA News Online]] |language=en |archive-date=2024-07-01 |archive-url=https://web.archive.org/web/20240701004416/https://www.gmanetwork.com/news/topstories/nation/902707/philippines-reports-h5n1-bird-flu-outbreak-on-poultry-farm/story/ |url-status=live }}</ref> |
On April 5, the Philippines reported a H5N1 outbreak on a poultry farm in [[Leyte]], which killed 4,475 birds. Earlier in the year, the Philippines Department of Agriculture temporarily banned poultry exports from several countries including Japan, Belgium, and France.<ref>{{Cite web |last= |date=2024-04-05 |title=Philippines reports H5N1 bird flu outbreak on poultry farm |url=https://www.gmanetwork.com/news/topstories/nation/902707/philippines-reports-h5n1-bird-flu-outbreak-on-poultry-farm/story/ |access-date=2024-04-04 |website=[[GMA Integrated News|GMA News Online]] |language=en |archive-date=2024-07-01 |archive-url=https://web.archive.org/web/20240701004416/https://www.gmanetwork.com/news/topstories/nation/902707/philippines-reports-h5n1-bird-flu-outbreak-on-poultry-farm/story/ |url-status=live }}</ref> |
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On July 6, it was reported that two Cambodian children became sick with H5N1 infections after handling dead chickens.<ref>{{cite news |last1=Schnirring |first1=Lisa |title=H5N1 avian flu infects 2 children in Cambodia |url=https://www.cidrap.umn.edu/avian-influenza-bird-flu/h5n1-avian-flu-infects-2-children-cambodia |access-date=13 July 2024 |agency=CIDRAP |publisher=University of Minnesota |date=9 July 2024}}</ref> |
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====India<!-- Use British English for this subsection -->==== |
====India<!-- Use British English for this subsection -->==== |
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On April 10, researchers found several cases of HPAI H5N1 in animals in New York City, including three Canada geese, a red-tailed hawk, a peregrine falcon, and a chicken.<ref>{{Cite news |last=Scripps News Staff |date=2024-04-10 |title=Researchers find bird flu cases among several animals in New York City |url=https://www.turnto23.com/researchers-find-bird-flu-cases-among-several-animals-in-new-york-city |archive-url=https://web.archive.org/web/20240412054448/https://www.turnto23.com/researchers-find-bird-flu-cases-among-several-animals-in-new-york-city |archive-date=2024-04-12 |access-date=2024-04-12 |work=[[KERO-TV|ABC23 Bakersfield]]}}</ref><ref>{{Cite news |last=Brennan |first=Martha |date=2024-04-11 |title=Bird flu found in animals in New York City parks |url=https://www.irishstar.com/news/new-york-news/bird-flu-found-animals-new-32567950 |access-date=2024-04-12 |work=Irish Star US |archive-date=2024-04-12 |archive-url=https://web.archive.org/web/20240412054949/https://www.irishstar.com/news/new-york-news/bird-flu-found-animals-new-32567950 |url-status=live }}</ref> Scientists have also found cases of H5N1 of clade 2.3.4.4b in [[common bottlenose dolphin]]s from [[Florida]].<ref>{{Cite journal |last1=Murawski |first1=Allison |last2=Fabrizio |first2=Thomas |last3=Ossiboff |first3=Robert |last4=Kackos |first4=Christina |last5=Jeevan |first5=Trushar |last6=Jones |first6=Jeremy C. |last7=Kandeil |first7=Ahmed |last8=Walker |first8=David |last9=Turner |first9=Jasmine C. M. |last10=Patton |first10=Christopher |last11=Govorkova |first11=Elena A. |last12=Hauck |first12=Helena |last13=Mickey |first13=Suzanna |last14=Barbeau |first14=Brittany |last15=Bommineni |first15=Y. Reddy |date=2024-04-18 |title=Highly pathogenic avian influenza A(H5N1) virus in a common bottlenose dolphin (Tursiops truncatus) in Florida |journal=Communications Biology |language=en |volume=7 |issue=1 |page=476 |doi=10.1038/s42003-024-06173-x |issn=2399-3642 |pmc=11026403 |pmid=38637646}}</ref> |
On April 10, researchers found several cases of HPAI H5N1 in animals in New York City, including three Canada geese, a red-tailed hawk, a peregrine falcon, and a chicken.<ref>{{Cite news |last=Scripps News Staff |date=2024-04-10 |title=Researchers find bird flu cases among several animals in New York City |url=https://www.turnto23.com/researchers-find-bird-flu-cases-among-several-animals-in-new-york-city |archive-url=https://web.archive.org/web/20240412054448/https://www.turnto23.com/researchers-find-bird-flu-cases-among-several-animals-in-new-york-city |archive-date=2024-04-12 |access-date=2024-04-12 |work=[[KERO-TV|ABC23 Bakersfield]]}}</ref><ref>{{Cite news |last=Brennan |first=Martha |date=2024-04-11 |title=Bird flu found in animals in New York City parks |url=https://www.irishstar.com/news/new-york-news/bird-flu-found-animals-new-32567950 |access-date=2024-04-12 |work=Irish Star US |archive-date=2024-04-12 |archive-url=https://web.archive.org/web/20240412054949/https://www.irishstar.com/news/new-york-news/bird-flu-found-animals-new-32567950 |url-status=live }}</ref> Scientists have also found cases of H5N1 of clade 2.3.4.4b in [[common bottlenose dolphin]]s from [[Florida]].<ref>{{Cite journal |last1=Murawski |first1=Allison |last2=Fabrizio |first2=Thomas |last3=Ossiboff |first3=Robert |last4=Kackos |first4=Christina |last5=Jeevan |first5=Trushar |last6=Jones |first6=Jeremy C. |last7=Kandeil |first7=Ahmed |last8=Walker |first8=David |last9=Turner |first9=Jasmine C. M. |last10=Patton |first10=Christopher |last11=Govorkova |first11=Elena A. |last12=Hauck |first12=Helena |last13=Mickey |first13=Suzanna |last14=Barbeau |first14=Brittany |last15=Bommineni |first15=Y. Reddy |date=2024-04-18 |title=Highly pathogenic avian influenza A(H5N1) virus in a common bottlenose dolphin (Tursiops truncatus) in Florida |journal=Communications Biology |language=en |volume=7 |issue=1 |page=476 |doi=10.1038/s42003-024-06173-x |issn=2399-3642 |pmc=11026403 |pmid=38637646}}</ref> |
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On April 26, the FDA reported the virus had spread to cow herds in nine states, including [[Colorado]], with one in five U.S. commercial milk samples testing positive for traces of bird flu.<ref>{{Cite news |date=2024-04-26 |title=Bird flu: one in five US commercial milk samples contain traces, says FDA |url=https://www.reuters.com/world/us/us-fda-says-about-1-5-commercial-milk-samples-tested-positive-bird-flu-traces-2024-04-26/ |access-date=2024-04-26 |work=Reuters |archive-date=2024-06-20 |archive-url=https://web.archive.org/web/20240620185515/https://www.reuters.com/world/us/us-fda-says-about-1-5-commercial-milk-samples-tested-positive-bird-flu-traces-2024-04-26/ |url-status=live }}</ref><ref>{{Cite web |last=Grewe |first=Lindsey |date=2024-04-28 |title=Bird flu confirmed in Colorado dairy cows |url=https://www.kktv.com/2024/04/28/bird-flu-confirmed-colorado-dairy-cows/ |access-date=2024-04-28 |website=[[KKTV]] |language=en |archive-date=2024-04-28 |archive-url=https://web.archive.org/web/20240428180616/https://www.kktv.com/2024/04/28/bird-flu-confirmed-colorado-dairy-cows/ |url-status=live }}</ref> H5N1 was found to be present at high levels in the mammary glands of affected cows, and cats that consumed unpasteurized milk from symptomatic cows displayed a high mortality rate from a severe systemic influenza infection.<ref>{{cite journal |last1=Burrough |first1=Eric |last2=Magstadt |first2=Drew |last3=Main |first3=Rodger |title=Highly Pathogenic Avian Influenza A(H5N1) Clade 2.3.4.4b Virus Infection in Domestic Dairy Cattle and Cats, United States, 2024 |journal=Emerging Infectious Diseases |date=29 April 2024 |volume=30 |issue=7 |doi=10.3201/eid3007.240508 |url=https://wwwnc.cdc.gov/eid/article/30/7/24-0508_article |access-date=30 April 2024 |archive-date=29 April 2024 |archive-url=https://web.archive.org/web/20240429235750/https://wwwnc.cdc.gov/eid/article/30/7/24-0508_article |url-status=live }}</ref> More than half the cats on one farm died after drinking raw milk from infected cows.<ref>{{Cite web |date=2024-04-30 |title=More than half of cats died after drinking raw milk from bird flu-infected cows - CBS News |url=https://www.cbsnews.com/news/cats-died-after-drinking-milk-bird-flu-infected-cows/ |access-date=2024-05-01 |website=www.cbsnews.com |language=en-US |archive-date=2024-05-01 |archive-url=https://web.archive.org/web/20240501002337/https://www.cbsnews.com/news/cats-died-after-drinking-milk-bird-flu-infected-cows/ |url-status=live }}</ref> |
On April 26, the FDA reported the virus had spread to cow herds in nine states, including [[Colorado]], with one in five U.S. commercial milk samples testing positive for traces of bird flu.<ref>{{Cite news |date=2024-04-26 |title=Bird flu: one in five US commercial milk samples contain traces, says FDA |url=https://www.reuters.com/world/us/us-fda-says-about-1-5-commercial-milk-samples-tested-positive-bird-flu-traces-2024-04-26/ |access-date=2024-04-26 |work=Reuters |archive-date=2024-06-20 |archive-url=https://web.archive.org/web/20240620185515/https://www.reuters.com/world/us/us-fda-says-about-1-5-commercial-milk-samples-tested-positive-bird-flu-traces-2024-04-26/ |url-status=live }}</ref><ref>{{Cite web |last=Grewe |first=Lindsey |date=2024-04-28 |title=Bird flu confirmed in Colorado dairy cows |url=https://www.kktv.com/2024/04/28/bird-flu-confirmed-colorado-dairy-cows/ |access-date=2024-04-28 |website=[[KKTV]] |language=en |archive-date=2024-04-28 |archive-url=https://web.archive.org/web/20240428180616/https://www.kktv.com/2024/04/28/bird-flu-confirmed-colorado-dairy-cows/ |url-status=live }}</ref> H5N1 was found to be present at high levels in the mammary glands of affected cows, and cats that consumed unpasteurized milk from symptomatic cows displayed a high mortality rate from a severe systemic influenza infection.<ref>{{cite journal |last1=Burrough |first1=Eric |last2=Magstadt |first2=Drew |last3=Main |first3=Rodger |title=Highly Pathogenic Avian Influenza A(H5N1) Clade 2.3.4.4b Virus Infection in Domestic Dairy Cattle and Cats, United States, 2024 |journal=Emerging Infectious Diseases |date=29 April 2024 |volume=30 |issue=7 |pages=1335–1343 |doi=10.3201/eid3007.240508 |pmid=38683888 |url=https://wwwnc.cdc.gov/eid/article/30/7/24-0508_article |access-date=30 April 2024 |archive-date=29 April 2024 |archive-url=https://web.archive.org/web/20240429235750/https://wwwnc.cdc.gov/eid/article/30/7/24-0508_article |url-status=live |pmc=11210653 }}</ref> More than half the cats on one farm died after drinking raw milk from infected cows.<ref>{{Cite web |date=2024-04-30 |title=More than half of cats died after drinking raw milk from bird flu-infected cows - CBS News |url=https://www.cbsnews.com/news/cats-died-after-drinking-milk-bird-flu-infected-cows/ |access-date=2024-05-01 |website=www.cbsnews.com |language=en-US |archive-date=2024-05-01 |archive-url=https://web.archive.org/web/20240501002337/https://www.cbsnews.com/news/cats-died-after-drinking-milk-bird-flu-infected-cows/ |url-status=live }}</ref> |
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On May 10, the [[Biden administration]] announced it would provide nearly $200 million to help contain the current outbreak. The [[US Department of Agriculture]] pledged $98 million at a split of $28,000 per dairy farm, while the [[Department of Health and Human Services]] (HHS) will provide $101 million split between the [[FDA]] and the [[US Centers for Disease Control and Prevention]] (CDC).<ref>{{Cite web |url=https://www.reuters.com/business/healthcare-pharmaceuticals/us-provide-nearly-200-million-contain-bird-flu-spread-dairy-farms-2024-05-10/ |title=US to provide nearly $200 million to contain bird flu spread on dairy farms |date=2024-05-10 |access-date=2024-05-10 |website=Reuters |last=Douglas |first=Leah}}</ref> |
On May 10, the [[Biden administration]] announced it would provide nearly $200 million to help contain the current outbreak. The [[US Department of Agriculture]] pledged $98 million at a split of $28,000 per dairy farm, while the [[Department of Health and Human Services]] (HHS) will provide $101 million split between the [[FDA]] and the [[US Centers for Disease Control and Prevention]] (CDC).<ref>{{Cite web |url=https://www.reuters.com/business/healthcare-pharmaceuticals/us-provide-nearly-200-million-contain-bird-flu-spread-dairy-farms-2024-05-10/ |title=US to provide nearly $200 million to contain bird flu spread on dairy farms |date=2024-05-10 |access-date=2024-05-10 |website=Reuters |last=Douglas |first=Leah}}</ref> |
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On May 22, a farm worker in Michigan was infected with the bird flu due to their regular exposure to infected dairy cows. The person had mild symptoms and recovered.<ref>{{Cite web|url=https://www.nbcnews.com/health/health-news/second-human-case-bird-flu-linked-dairy-cows-found-michigan-rcna153536|title=Second human case of bird flu linked to dairy cows found in Michigan|date=2024-05-22|last1=Edwards|first1=Erika|last2=Miller|first2=Sara G.|website=[[NBC News]]|access-date=2024-05-23|archive-date=2024-05-23|archive-url=https://web.archive.org/web/20240523043350/https://www.nbcnews.com/health/health-news/second-human-case-bird-flu-linked-dairy-cows-found-michigan-rcna153536|url-status=live}}</ref> It was shown that H5N1 can persist on milking equipment, which provides a probable transmission route for cow-to-cow and cow-to-human spread.<ref>{{cite news |last1=Schnirring |first1=Lisa |title=H5N1 avian flu viruses can persist on milking equipment surfaces |url=https://www.cidrap.umn.edu/avian-influenza-bird-flu/h5n1-avian-flu-viruses-can-persist-milking-equipment-surfaces |access-date=24 May 2024 |agency=CIDRAP |publisher=[[University of Minnesota]] |date=24 May 2024 |archive-date=23 May 2024 |archive-url=https://web.archive.org/web/20240523230917/https://www.cidrap.umn.edu/avian-influenza-bird-flu/h5n1-avian-flu-viruses-can-persist-milking-equipment-surfaces |url-status=live }}</ref> On May 30, it was announced that a second Michigan farm worker from a different dairy farm had been diagnosed with bird flu after exhibiting respiratory symptoms.<ref name="Mandavilli 2024">{{cite web |last=Mandavilli |first=Apoorva |title=Bird Flu Has Infected a Third U.S. Farmworker |website=[[The New York Times]] |date=May 30, 2024 |url=https://www.nytimes.com/2024/05/30/health/bird-flu-infection-farmworker.html |access-date=May 31, 2024 |archive-date=May 31, 2024 |archive-url=https://web.archive.org/web/20240531003635/https://www.nytimes.com/2024/05/30/health/bird-flu-infection-farmworker.html |url-status=live }}</ref><ref name="Edwards 2024">{{cite web |last=Edwards |first=Erika |title=Third person infected in U.S. bird flu outbreak |website=[[NBC News]] |date=May 30, 2024 |url=https://www.nbcnews.com/health/health-news/cdc-third-person-infected-bird-flu-new-symptom-rcna154697 |access-date=May 31, 2024 |archive-date=May 31, 2024 |archive-url=https://web.archive.org/web/20240531014134/https://www.nbcnews.com/health/health-news/cdc-third-person-infected-bird-flu-new-symptom-rcna154697 |url-status=live }}</ref> |
On May 22, a farm worker in Michigan was infected with the bird flu due to their regular exposure to infected dairy cows. The person had mild symptoms and recovered.<ref>{{Cite web|url=https://www.nbcnews.com/health/health-news/second-human-case-bird-flu-linked-dairy-cows-found-michigan-rcna153536|title=Second human case of bird flu linked to dairy cows found in Michigan|date=2024-05-22|last1=Edwards|first1=Erika|last2=Miller|first2=Sara G.|website=[[NBC News]]|access-date=2024-05-23|archive-date=2024-05-23|archive-url=https://web.archive.org/web/20240523043350/https://www.nbcnews.com/health/health-news/second-human-case-bird-flu-linked-dairy-cows-found-michigan-rcna153536|url-status=live}}</ref> It was shown that H5N1 can persist on milking equipment, which provides a probable transmission route for cow-to-cow and cow-to-human spread.<ref>{{cite news |last1=Schnirring |first1=Lisa |title=H5N1 avian flu viruses can persist on milking equipment surfaces |url=https://www.cidrap.umn.edu/avian-influenza-bird-flu/h5n1-avian-flu-viruses-can-persist-milking-equipment-surfaces |access-date=24 May 2024 |agency=CIDRAP |publisher=[[University of Minnesota]] |date=24 May 2024 |archive-date=23 May 2024 |archive-url=https://web.archive.org/web/20240523230917/https://www.cidrap.umn.edu/avian-influenza-bird-flu/h5n1-avian-flu-viruses-can-persist-milking-equipment-surfaces |url-status=live }}</ref> On May 30, it was announced that a second Michigan farm worker from a different dairy farm had been diagnosed with bird flu after exhibiting respiratory symptoms.<ref name="Mandavilli 2024">{{cite web |last=Mandavilli |first=Apoorva |title=Bird Flu Has Infected a Third U.S. Farmworker |website=[[The New York Times]] |date=May 30, 2024 |url=https://www.nytimes.com/2024/05/30/health/bird-flu-infection-farmworker.html |access-date=May 31, 2024 |archive-date=May 31, 2024 |archive-url=https://web.archive.org/web/20240531003635/https://www.nytimes.com/2024/05/30/health/bird-flu-infection-farmworker.html |url-status=live }}</ref><ref name="Edwards 2024">{{cite web |last=Edwards |first=Erika |title=Third person infected in U.S. bird flu outbreak |website=[[NBC News]] |date=May 30, 2024 |url=https://www.nbcnews.com/health/health-news/cdc-third-person-infected-bird-flu-new-symptom-rcna154697 |access-date=May 31, 2024 |archive-date=May 31, 2024 |archive-url=https://web.archive.org/web/20240531014134/https://www.nbcnews.com/health/health-news/cdc-third-person-infected-bird-flu-new-symptom-rcna154697 |url-status=live }}</ref> |
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In early June, a flock of 4.2 million egg-laying chickens and a flock of 103,000 turkeys were infected in [[Iowa]].<ref>{{Cite web|url=https://iowacapitaldispatch.com/briefs/bird-flu-found-in-second-iowa-flock-in-a-week/|title=Bird flu found in second Iowa flock in a week|last=Strong|first=Jared|date=2024-06-03|access-date=2024-06-03|website=Iowa Capital Dispatch|archive-date=2024-06-03|archive-url=https://web.archive.org/web/20240603160523/https://iowacapitaldispatch.com/briefs/bird-flu-found-in-second-iowa-flock-in-a-week/|url-status=live}}</ref> It was also that reported that HPAI H5N1 had spread to dairy |
In early June, a flock of 4.2 million egg-laying chickens and a flock of 103,000 turkeys were infected in [[Iowa]].<ref>{{Cite web|url=https://iowacapitaldispatch.com/briefs/bird-flu-found-in-second-iowa-flock-in-a-week/|title=Bird flu found in second Iowa flock in a week|last=Strong|first=Jared|date=2024-06-03|access-date=2024-06-03|website=Iowa Capital Dispatch|archive-date=2024-06-03|archive-url=https://web.archive.org/web/20240603160523/https://iowacapitaldispatch.com/briefs/bird-flu-found-in-second-iowa-flock-in-a-week/|url-status=live}}</ref> It was also that reported that HPAI H5N1 had spread to dairy herds in Iowa,<ref>{{Cite news|title=Bird flu infects yet another Sioux County dairy herd|date=2024-06-25|access-date=2024-06-27|publisher=Iowa Capital Dispatch|website=[[The Gazette (Cedar Rapids)|The Gazette]]|url=https://www.thegazette.com/agriculture/bird-flu-infects-yet-another-sioux-county-dairy-herd/|first=Jack|last=O'Connor|archive-date=2024-06-27|archive-url=https://web.archive.org/web/20240627185746/https://www.thegazette.com/agriculture/bird-flu-infects-yet-another-sioux-county-dairy-herd/|url-status=live}}</ref> as well as [[Minnesota]], [[Wyoming]] and [[Oklahoma]],<ref>{{cite web |title=Highly Pathogenic Avian Influenza Detected in Oklahoma Dairy Herd |url=https://ag.ok.gov/highly-pathogenic-avian-influenza-detected-in-oklahoma-dairy-herd/ |website=Animal Health |publisher=Oklahoma Department of Agriculture |access-date=13 July 2024}}</ref> increasing the number of states with infected dairy herds to thirteen.<ref>{{cite news |last1=Polansek |first1=Tom |title=Bird flu reported in Iowa dairy herd, expanding US outbreak in cows |url=https://www.canadiancattlemen.ca/daily/bird-flu-reported-in-iowa-dairy-herd-expanding-us-outbreak-in-cows/ |access-date=5 June 2024 |agency=Canadian Cattlemen |date=5 June 2024}}</ref><ref>{{cite web |last1=Crusan |first1=Michael |title=Amid uptick in poultry detections, Minnesota reports first case of avian influenza in a dairy herd |url=https://www.bah.state.mn.us/news_release/amid-uptick-in-poultry-detections-minnesota-reports-first-case-of-avian-influenza-in-a-dairy-herd/#:~:text=H5N1%20Highly%20Pathogenic%20Avian%20Influenza,cows%20had%20signs%20of%20fever. |website=Minnesota Board of Animal Health |access-date=6 June 2024 |archive-date=6 June 2024 |archive-url=https://web.archive.org/web/20240606154439/https://www.bah.state.mn.us/news_release/amid-uptick-in-poultry-detections-minnesota-reports-first-case-of-avian-influenza-in-a-dairy-herd/#:~:text=H5N1%20Highly%20Pathogenic%20Avian%20Influenza,cows%20had%20signs%20of%20fever. |url-status=live }}</ref><ref>{{cite news |last1=Beck |first1=Madelyn |title=Bird flu found in Wyoming dairy cows |url=https://wyofile.com/bird-flu-found-in-wyoming-dairy-cows/ |access-date=9 June 2024 |agency=Wyofile |date=7 June 2024 |archive-date=9 June 2024 |archive-url=https://web.archive.org/web/20240609082920/https://wyofile.com/bird-flu-found-in-wyoming-dairy-cows/ |url-status=live }}</ref> As of June 6, infected dairy cows in five states, South Dakota, Michigan, Texas, Ohio, and Colorado, had died from the H5N1 avian flu, with an estimated mortality rate of up to 10%.<ref>{{Cite web|url=https://www.theglobeandmail.com/world/article-dairy-cows-infected-with-bird-flu-have-died-in-five-us-states/|title=Dairy cows infected with avian flu have died in five U.S. states|last1=Douglas|first1=Leah|last2=Polansek|first2=Tom|date=2024-06-06|website=[[The Globe and Mail]]|access-date=2024-06-06|archive-date=2024-07-01|archive-url=https://web.archive.org/web/20240701004917/https://www.theglobeandmail.com/world/article-dairy-cows-infected-with-bird-flu-have-died-in-five-us-states/|url-status=live}}</ref> |
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Beginning in late June, the USDA launched voluntary pilot programs to test bulk milk tanks on dairy farms in four states: Kansas, Nebraska, New Mexico, and Texas. Farmers who volunteer for the program were allowed to move their herds across state lines without additional testing if their bulk milk tanks were found negative for H5N1 for three consecutive weeks.<ref>{{Cite news|url=https://www.kmuw.org/agriculture/2024-06-26/as-bird-flu-spreads-in-the-u-s-kansas-will-begin-voluntary-testing-of-dairy-farm-milk-tanks|title=As bird flu spreads in the U.S., Kansas will begin voluntary testing of dairy farm milk tanks|first=Jennifer|last=Shutt|date=2024-06-26|access-date=2024-06-27|archive-url=https://web.archive.org/web/20240626162506/https://www.kmuw.org/agriculture/2024-06-26/as-bird-flu-spreads-in-the-u-s-kansas-will-begin-voluntary-testing-of-dairy-farm-milk-tanks|archive-date=2024-06-26|url-status=live|website=[[KMUW]]|publisher=[[KCUR-FM]]}}</ref> |
Beginning in late June, the USDA launched voluntary pilot programs to test bulk milk tanks on dairy farms in four states: Kansas, Nebraska, New Mexico, and Texas. Farmers who volunteer for the program were allowed to move their herds across state lines without additional testing if their bulk milk tanks were found negative for H5N1 for three consecutive weeks.<ref>{{Cite news|url=https://www.kmuw.org/agriculture/2024-06-26/as-bird-flu-spreads-in-the-u-s-kansas-will-begin-voluntary-testing-of-dairy-farm-milk-tanks|title=As bird flu spreads in the U.S., Kansas will begin voluntary testing of dairy farm milk tanks|first=Jennifer|last=Shutt|date=2024-06-26|access-date=2024-06-27|archive-url=https://web.archive.org/web/20240626162506/https://www.kmuw.org/agriculture/2024-06-26/as-bird-flu-spreads-in-the-u-s-kansas-will-begin-voluntary-testing-of-dairy-farm-milk-tanks|archive-date=2024-06-26|url-status=live|website=[[KMUW]]|publisher=[[KCUR-FM]]}}</ref> |
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By the end of July, it had become apparent that [[Weld County, Colorado]] had become the centre of the unprecedented multi-species outbreak of H5N1 in the United States. Outbreaks in multiple large poultry facilities and intensive dairy farms led to ten human farm-worker cases being reported in and around the county.<ref>{{cite news |last1=Schnirring |first1=Lisa |title=Colorado reports 2 more avian flu infections in poultry cullers |url=https://www.cidrap.umn.edu/avian-influenza-bird-flu/colorado-reports-2-more-avian-flu-infections-poultry-cullers |access-date=27 July 2024 |agency=CIDRAP |publisher=University of Minnesota |date=26 July 2024}}</ref> Research conducted in this region showed H5N1 as having the ability to replicate copiously in bovine mammary glands leading to multi-directional intra- and inter-species transmission between cows, humans, cats, birds and a raccoon. It was also shown that asymptomatic cows could spread the disease.<ref>{{cite journal |last1=Caserta |first1=L.C. |last2=Frye |first2=E.A. |last3=Butt |first3=S.L. |last4=Dimitrov |first4=K.M. |last5=Diel |first5=D.G. |title=Spillover of highly pathogenic avian influenza H5N1 virus to dairy cattle |journal=Nature |date=25 July 2024 |doi=10.1038/s41586-024-07849-4 |url=https://www.nature.com/articles/s41586-024-07849-4 |access-date=27 July 2024}}</ref> |
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In response, the Colorado authorities brought in mandatory milk tank testing (excluding [[raw milk]] producers) and an on-line data tracker for human cases in the state.<ref>{{cite web |title=Colorado Avian Influenza Updates |url=https://ag.colorado.gov/animal-health/reportable-diseases/highly-pathogenic-avian-influenza-hpai-outbreak |website=ag.colorado.gov |publisher=Colorado Department of Agriculture |access-date=27 July 2024}}</ref> |
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In late August, H5N1 had spread to dairy cow herds in [[California]].<ref>{{cite news |last1=Polansek |first1=Tom |title=Bird flu infects California dairy cows, widening US outbreak |url=https://www.reuters.com/world/us/us-tests-bird-flu-california-dairy-cattle-2024-08-30/ |access-date=1 September 2024 |agency=Reuters |date=31 August 2024}}</ref> |
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H5-2.3.4.4b can be prevented by vaccination in chickens. The H5-Re14 (2.3.4.4b) strain used in updated vaccines since 2022 is a reasonably good match for the new virus.<ref name=Tian2023>{{cite journal |last1=Tian |first1=Jingman |last2=Bai |first2=Xiaoli |last3=Li |first3=Minghui |last4=Zeng |first4=Xianying |last5=Xu |first5=Jia |last6=Li |first6=Peng |last7=Wang |first7=Miao |last8=Song |first8=Xingdong |last9=Zhao |first9=Zhiguo |last10=Tian |first10=Guobin |last11=Liu |first11=Liling |last12=Guan |first12=Yuntao |last13=Li |first13=Yanbing |last14=Chen |first14=Hualan |title=Highly Pathogenic Avian Influenza Virus (H5N1) Clade 2.3.4.4b Introduced by Wild Birds, China, 2021 |journal=Emerging Infectious Diseases |date=July 2023 |volume=29 |issue=7 |pages=1367–75 |doi=10.3201/eid2907.221149 |doi-access=free|pmid=37347504 |pmc=10310395 }}</ref> |
H5-2.3.4.4b can be prevented by vaccination in chickens. The H5-Re14 (2.3.4.4b) strain used in updated vaccines since 2022 is a reasonably good match for the new virus.<ref name=Tian2023>{{cite journal |last1=Tian |first1=Jingman |last2=Bai |first2=Xiaoli |last3=Li |first3=Minghui |last4=Zeng |first4=Xianying |last5=Xu |first5=Jia |last6=Li |first6=Peng |last7=Wang |first7=Miao |last8=Song |first8=Xingdong |last9=Zhao |first9=Zhiguo |last10=Tian |first10=Guobin |last11=Liu |first11=Liling |last12=Guan |first12=Yuntao |last13=Li |first13=Yanbing |last14=Chen |first14=Hualan |title=Highly Pathogenic Avian Influenza Virus (H5N1) Clade 2.3.4.4b Introduced by Wild Birds, China, 2021 |journal=Emerging Infectious Diseases |date=July 2023 |volume=29 |issue=7 |pages=1367–75 |doi=10.3201/eid2907.221149 |doi-access=free|pmid=37347504 |pmc=10310395 }}</ref> |
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In 2024, [[Penn Medicine]] announced it had created a human avian flu vaccine on the same platform as its [[COVID-19 vaccine]]. As of May, the experimental [[mRNA vaccine]] utilizing [[lipid nanoparticles]] (LNPs) has worked to protect lab animals from severe illness and death for at least one year prior to the announcement. The vaccine was tested in [[mice]] and [[ferrets]], and all vaccinated animals were found to survive H5N1 infections.<ref name="6ABC">{{Cite web|url=https://6abc.com/post/university-pennsylvania-creates-human-mrna-bird-flu-vaccine/14886713/|title=Penn Medicine creates human bird flu vaccine|date=2024-05-29|access-date=2024-05-29|website=[[WPVI-TV|6ABC]]|archive-date=2024-05-29|archive-url=https://web.archive.org/web/20240529172923/https://6abc.com/post/university-pennsylvania-creates-human-mrna-bird-flu-vaccine/14886713/|url-status=live}}</ref><ref name="PennMed">{{Cite web|url=https://www.pennmedicine.org/news/news-releases/2024/may/penn-researchers-develop-experimental-mrna-avian-flu-vaccine|title=Penn Researchers Develop Experimental mRNA Avian Flu Vaccine|date=2024-05-23|access-date=2024-05-29|last=Geesler|first=Kelsey|website=[[Penn Medicine|Penn Medicine News]]}}</ref><ref name="PennVaccineNatureComms">{{Cite journal |title=Development of a nucleoside-modified mRNA vaccine against clade 2.3.4.4b H5 highly pathogenic avian influenza virus |journal=[[Nature Communications]] |last1=Furey |first1=Colleen |date=2024-05-23 |volume=15|article-number=4350 |last2=Scher |first2=Gabrielle |doi=10.1038/s41467-024-48555-z |last3=Ye |first3=Naiqing |last4=Kercher |first4=Lisa |last5=DeBeauchamp |first5=Jennifer |last6=Crumpton |first6=Jeri Carol |last7=Jeevan |first7=Trushar |last8=Patton |first8=Christopher |last9=Franks |first9=John |last10=Rubrum |first10=Adam |last11=Alameh |first11=Mohammed-Gabriel |last12=Fan |first12=Steven H.Y. |last13=Phan |first13=Anthony T. |last14=Hunter |first14=Christopher A. |last15=Webby |first15=Richard J.|last16=Hensley|first16=Scott E.|last17=Weissman|first17=Drew |issue=1 |page=4350 |pmid=38782954 |pmc=11116520 }}</ref> |
In 2024, [[Penn Medicine]] announced it had created a human avian flu vaccine on the same platform as its [[COVID-19 vaccine]]. As of May, the experimental [[mRNA vaccine]] utilizing [[lipid nanoparticles]] (LNPs) has worked to protect lab animals from severe illness and death for at least one year prior to the announcement. The vaccine was tested in [[mice]] and [[ferrets]], and all vaccinated animals were found to survive H5N1 infections.<ref name="6ABC">{{Cite web|url=https://6abc.com/post/university-pennsylvania-creates-human-mrna-bird-flu-vaccine/14886713/|title=Penn Medicine creates human bird flu vaccine|date=2024-05-29|access-date=2024-05-29|website=[[WPVI-TV|6ABC]]|archive-date=2024-05-29|archive-url=https://web.archive.org/web/20240529172923/https://6abc.com/post/university-pennsylvania-creates-human-mrna-bird-flu-vaccine/14886713/|url-status=live}}</ref><ref name="PennMed">{{Cite web|url=https://www.pennmedicine.org/news/news-releases/2024/may/penn-researchers-develop-experimental-mrna-avian-flu-vaccine|title=Penn Researchers Develop Experimental mRNA Avian Flu Vaccine|date=2024-05-23|access-date=2024-05-29|last=Geesler|first=Kelsey|website=[[Penn Medicine|Penn Medicine News]]}}</ref><ref name="PennVaccineNatureComms">{{Cite journal |title=Development of a nucleoside-modified mRNA vaccine against clade 2.3.4.4b H5 highly pathogenic avian influenza virus |journal=[[Nature Communications]] |last1=Furey |first1=Colleen |date=2024-05-23 |volume=15|article-number=4350 |last2=Scher |first2=Gabrielle |doi=10.1038/s41467-024-48555-z |last3=Ye |first3=Naiqing |last4=Kercher |first4=Lisa |last5=DeBeauchamp |first5=Jennifer |last6=Crumpton |first6=Jeri Carol |last7=Jeevan |first7=Trushar |last8=Patton |first8=Christopher |last9=Franks |first9=John |last10=Rubrum |first10=Adam |last11=Alameh |first11=Mohammed-Gabriel |last12=Fan |first12=Steven H.Y. |last13=Phan |first13=Anthony T. |last14=Hunter |first14=Christopher A. |last15=Webby |first15=Richard J.|last16=Hensley|first16=Scott E.|last17=Weissman|first17=Drew |issue=1 |page=4350 |pmid=38782954 |pmc=11116520 }}</ref> |
||
== Antibodies == |
== Antibodies == |
Latest revision as of 03:50, 1 September 2024
Since 2020, outbreaks of avian influenza subtype H5N1 have been occurring, with cases reported from every continent as of May 2024.[1][2][3][4] Some species of wild aquatic birds act as natural asymptomatic carriers of a large variety of influenza A viruses, which can infect poultry, other bird species, mammals and humans if they come into close contact with infected feces or contaminated material, or by eating infected birds.[5] In late 2023, H5N1 was discovered in the Antarctic for the first time, raising fears of imminent spread throughout the region, potentially leading to a "catastrophic breeding failure" among animals that had not previously been exposed to avian influenza viruses.[6] The main virus involved in the global outbreak is classified as H5N1 clade 2.3.4.4b, however genetic diversification with other clades such as 2.3.2.1c has seen the virus evolve in ability to cause significant outbreaks in a broader range of species including mammals.[7][8][9]
H5N6 and H5N8 viruses with the H5-2.3.4.4b hemagglutinin (HA) gene became prominent globally in 2018–2020.[8][10] In 2020, reassortment (genetic "swapping") between these H5-2.3.4.4b viruses and other strains of avian influenza led to the emergence of a H5N1 strain with a H5-2.3.4.4b gene.[8] The virus then spread across Europe, detected there in autumn, before spreading to Africa and Asia.[1] It continues to swap genes with local flu viruses as it travels the globe.[11]: (fig.1)
Timeline
[edit]![](http://upload.wikimedia.org/wikipedia/commons/thumb/d/d9/H5N1_globe_2023.svg/400px-H5N1_globe_2023.svg.png)
2020 and prior
[edit]![](http://upload.wikimedia.org/wikipedia/commons/thumb/3/39/Formation_of_the_index_H5N1_virus_bearing_the_2.3.4.4b_HA_gene_in_2020.png/220px-Formation_of_the_index_H5N1_virus_bearing_the_2.3.4.4b_HA_gene_in_2020.png)
Genetic reassortment of several influenza A strains culminates in the emergence of a highly pathogenic H5N1 subtype bearing the clade 2.3.4.4b hemagglutinin (HA) gene.[13][12]
2021
[edit]In May 2021, H5N1 was detected in wild red foxes in the Netherlands.[14] It was later detected in December in Estonia in wild foxes.[1][15]
2022
[edit]In January 2022, an infection in an eighty-year-old man was reported, who raised ducks in England.[1] Also in January, infections were reported from the United States in wild birds.[1] In February, infections were reported from commercial poultry centres in the U.S., and Peru reported infections in sea lions.[1][16] The virus continued to spread further, infecting additional species of mammals. In October, a mink farm in northwest Spain was affected.[1] In December, a HPAI H5N1 subtype of clade 2.3.4.4b was found in a captive Asian black bear and in wild and captive birds in a wildlife park in France.[17]
A human case of H5N1 was reported in the U.S. in April, "though this detection may have been the result of contamination of the nasal passages with the virus rather than actual infection."[1][18] In September, Spain reported a human case; this was followed by a second case in November, in a person who worked at the same poultry farm as the first. Both were asymptomatic.[1][19] In November, China reported a human case, infected due to contact with poultry. The case died from their infection.[1]
2023
[edit]Antarctic islands
[edit]H5N1 was first detected in the islands of the Antarctic region in October 2023, via a brown skua on Bird Island, near South Georgia. Within several months, hundreds of elephant seals were found dead, as well as fur seals, kelp gulls and further brown skua.[20]
Arctic
[edit]In December 2023, conservation officials confirmed that a polar bear had died of H5N1 near Alaska's northernmost city, Utqiagvik.[20]
Brasilien
[edit]On May 22, Brazil declared an 180-day "animal health emergency" in response to eight cases of H5N1 found in wild birds. Although Brazil's major poultry-producing regions are in the country's south and the infections were found in Espirito Santo state and Rio de Janeiro state, Brazil, as the world's largest exporter of chicken meat, created an emergency operations center to plan for and mitigate potential further spread of H5N1.[21]
Kanada
[edit]On April 1st of 2023 a domestic dog in Oshawa, Canada was tested positive for H5N1.[22]
Kambodscha
[edit]In February 2023, Cambodia reported the death of a girl due to H5N1 infection after developing symptoms on 16 February.[23][24] The girl's father also tested positive for the virus. The World Health Organization (WHO) described the situation as "worrying" and urged "heightened vigilance".[25][26][27] Further sequencing determined that at least one of the two cases was from an older H5N1 clade, 2.3.2.1c, which had circulated as a common H5N1 strain in Cambodia for many years, rather than the more recent clade 2.3.4.4b, which had caused mass poultry deaths since 2020. This older clade had jumped to humans in the past yet hadn't previously resulted in any known human-to-human transmission.[28]
On March 1, 2023, as Taiwan raised its travel alert for Cambodia, the WHO and the U.S. Center for Disease and Control and Prevention (CDC), in concert with Cambodian authorities, determined that both of the individuals had been infected through direct contact with poultry.[29][30]
South America
[edit]In late February 2023, Argentina confirmed a case of H5N1 in industrial poultry, in the Rio Negro province. Avian product exports were suspended as a result.[31]
In March 2023, H5N1 was detected in black-necked swan populations in Carlos Anwandter Nature Sanctuary, Chile and Uruguay.[32][33] In Uruguay the death of ten swans found in the locality of Estación Tapia was attributed to flu.[33] Previously in Uruguay ten hens had died because of the flu in El Monarca, Montevideo.[33]
In late March 2023, Chile detected H5N1 in a 53-year-old man who had severe symptoms.[34] The patient survived but had to stay on a ventilator. The virus was determined to be in the 2.3.4.4b lineage.[35]
In September 2023, Uruguay reported upwards of 400 seals and sea lions found dead of H5N1 on the nation's Atlantic coastline and along the River Plate.[36]
According to a 2024 paper, a large outbreak of H5N1 killed 70% of elephant seal pups born in the 2023 breeding season. In surveyed areas of Península Valdés, Argentina, seal mortality rates exceed 96%.[7] A February 2024 article reports that the outbreak in South America has, since 2022, killed at least 600,000 wild birds and 50,000 mammals.[7]
2024
[edit]Southeast Asia
[edit]A cluster of five human infections of H5N1 occurred in Cambodia in late January and early February. All patients had recent contact with sick poultry. One patient died. Sequencing of two of the patients indicate that they were infected by clade 2.3.2.1c, which is not the same same as the 2.3.4.4b clade virus that is causing global outbreaks in the US and beyond.[37] A person in Vietnam died of H5N1 infection around the same time.[38] It remains unreported which clade of H5 virus the patient in Vietnam was infected by. However, an April 2024 statement from the FAO reports that recent (~2023) reassortment in the Greater Mekong Subregion has produced viruses that carry internal genes from the new 2.3.4.4b virus but the H5 gene from the old 2.3.2.1c lineage. The FAO also states that the new type of virus is implicated in human cases, but it does not specify which.[39]
On April 5, the Philippines reported a H5N1 outbreak on a poultry farm in Leyte, which killed 4,475 birds. Earlier in the year, the Philippines Department of Agriculture temporarily banned poultry exports from several countries including Japan, Belgium, and France.[40]
On July 6, it was reported that two Cambodian children became sick with H5N1 infections after handling dead chickens.[41]
Indien
[edit]On April 18, a H5N1 outbreak was detected in ducks in two parts in Alappuzha district, Kerala. The disease was confirmed in a lab for ducks reared in the area. The District Collector has decided to initiate the process of culling domestic birds within a 1 kilometre radius from the epicentre of the outbreak.[42] As of May 9, district officials have culled 60,232 birds in Alappuzha. Farmers were compensated ₹100 per ducklings and chicks, ₹200 per older bird, and ₹5 per egg destroyed.[43]
China
[edit]On May 18, Chinese authorities confirm 275 cases of bird flu in dead Pallas's gulls and other wild birds in two counties in Qinghai province.[44]
Vereinigte Staaten
[edit]The US CDC continues to report "widespread" occurrence in wild birds, "sporadic outbreaks" in poultry flocks, and "sporadic infections" as of March 2024.[45] As of March 8, 2024, the United States Department of Agriculture's (USDA) Animal and Plant Health Inspection Service (APHIS) had recorded around 20 mammal species confirmed as being able to be infected by H5N1.[46] Also in March 2024, H5N1 was confirmed to have infected farmed goats and cows in the USA.[47][48]
On April 2, a dairy worker in Texas became infected, and strong indications of cow-to-cow spread were evident as cow herds in five different states became ill.[49] A few days later, on April 4, H5N1 was confirmed to have spread to several additional dairy herds in six US states, including Texas, along with Idaho, Kansas, New Mexico, Ohio and Michigan. Scientists deemed these to be either cow-to-cow transmission or spillover from wild birds.[50][51][52] On April 11, H5N1 was found in dairy cattle herds in North Carolina and South Dakota.[53][54]
On April 10, researchers found several cases of HPAI H5N1 in animals in New York City, including three Canada geese, a red-tailed hawk, a peregrine falcon, and a chicken.[55][56] Scientists have also found cases of H5N1 of clade 2.3.4.4b in common bottlenose dolphins from Florida.[57]
On April 26, the FDA reported the virus had spread to cow herds in nine states, including Colorado, with one in five U.S. commercial milk samples testing positive for traces of bird flu.[58][59] H5N1 was found to be present at high levels in the mammary glands of affected cows, and cats that consumed unpasteurized milk from symptomatic cows displayed a high mortality rate from a severe systemic influenza infection.[60] More than half the cats on one farm died after drinking raw milk from infected cows.[61]
On May 10, the Biden administration announced it would provide nearly $200 million to help contain the current outbreak. The US Department of Agriculture pledged $98 million at a split of $28,000 per dairy farm, while the Department of Health and Human Services (HHS) will provide $101 million split between the FDA and the US Centers for Disease Control and Prevention (CDC).[62]
On May 16, the US Department of Agriculture's National Veterinary Services Laboratories confirmed positive tests for the virus in alpacas on a farm in Idaho, who had to be culled.[63]
On May 22, a farm worker in Michigan was infected with the bird flu due to their regular exposure to infected dairy cows. The person had mild symptoms and recovered.[64] It was shown that H5N1 can persist on milking equipment, which provides a probable transmission route for cow-to-cow and cow-to-human spread.[65] On May 30, it was announced that a second Michigan farm worker from a different dairy farm had been diagnosed with bird flu after exhibiting respiratory symptoms.[66][67]
In early June, a flock of 4.2 million egg-laying chickens and a flock of 103,000 turkeys were infected in Iowa.[68] It was also that reported that HPAI H5N1 had spread to dairy herds in Iowa,[69] as well as Minnesota, Wyoming and Oklahoma,[70] increasing the number of states with infected dairy herds to thirteen.[71][72][73] As of June 6, infected dairy cows in five states, South Dakota, Michigan, Texas, Ohio, and Colorado, had died from the H5N1 avian flu, with an estimated mortality rate of up to 10%.[74]
Beginning in late June, the USDA launched voluntary pilot programs to test bulk milk tanks on dairy farms in four states: Kansas, Nebraska, New Mexico, and Texas. Farmers who volunteer for the program were allowed to move their herds across state lines without additional testing if their bulk milk tanks were found negative for H5N1 for three consecutive weeks.[75]
By the end of July, it had become apparent that Weld County, Colorado had become the centre of the unprecedented multi-species outbreak of H5N1 in the United States. Outbreaks in multiple large poultry facilities and intensive dairy farms led to ten human farm-worker cases being reported in and around the county.[76] Research conducted in this region showed H5N1 as having the ability to replicate copiously in bovine mammary glands leading to multi-directional intra- and inter-species transmission between cows, humans, cats, birds and a raccoon. It was also shown that asymptomatic cows could spread the disease.[77]
In response, the Colorado authorities brought in mandatory milk tank testing (excluding raw milk producers) and an on-line data tracker for human cases in the state.[78]
In late August, H5N1 had spread to dairy cow herds in California.[79]
Antarktis
[edit]H5N1 was detected in dead birds on the Antarctic mainland for the first time in February 2024.[80] In February, scientists found H5N1 in 12 Antarctic skua seabirds carcasses on Beak Island. Additional cases have also been found at Hope Bay and on the Devil and Paulet islands. In March, scientists detected the virus in nine Adélie penguins and one Antarctic cormorant.[81]
Australien
[edit]In May 2024, H5N1 was detected for the first time in Australia after a human child who had returned to the country from India tested positive. The child was infected with the South Asian 2.3.2.1a clade of H5N1 and had severe symptoms but recovered.[82][83]
Control
[edit]H5-2.3.4.4b can be prevented by vaccination in chickens. The H5-Re14 (2.3.4.4b) strain used in updated vaccines since 2022 is a reasonably good match for the new virus.[11]
In 2024, Penn Medicine announced it had created a human avian flu vaccine on the same platform as its COVID-19 vaccine. As of May, the experimental mRNA vaccine utilizing lipid nanoparticles (LNPs) has worked to protect lab animals from severe illness and death for at least one year prior to the announcement. The vaccine was tested in mice and ferrets, and all vaccinated animals were found to survive H5N1 infections.[84][85][86]
Antibodies
[edit]In May 2024, a study was published in Emerging Infectious Diseases reporting that subclade 2.3.4.4b H5N1 HPIAV strains that circulated in North America during 2022–2023 were poorly adapted to dogs. The authors suggest that effective risk communication with hunting dog owners could be an inexpensive and effective strategy to reduce the potential for spillover to dogs, and monitoring hunting dogs for IAV could be a useful addition to existing surveillance efforts.[87]
See also
[edit]References
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- ^ a b Shi, Jianzhong; Zeng, Xianying; Cui, Pengfei; Yan, Cheng; Chen, Hualan (2023-12-31). "Alarming situation of emerging H5 and H7 avian influenza and effective control strategies". Emerging Microbes & Infections. 12 (1). doi:10.1080/22221751.2022.2155072. ISSN 2222-1751. PMC 9754034. PMID 36458831.
- ^ "Genetic and antigenic characteristics of clade 2.3.4.4b A(H5N1) viruses identified in dairy cattle in the United States of America". World Health Organization. 22 May 2024.
- ^ Rijks, Jolianne M.; Hesselink, Hanna; Lollinga, Pim; Wesselman, Renee; Prins, Pier; Weesendorp, Eefke; Engelsma, Marc; Heutink, Rene; Harders, Frank; Kik, Marja; Rozendaal, Harry; van den Kerkhof, Hans; Beerens, Nancy (November 2021). "Highly Pathogenic Avian Influenza A(H5N1) Virus in Wild Red Foxes, the Netherlands, 2021". Emerging Infectious Diseases. 27 (11): 2960–2. doi:10.3201/eid2711.211281. PMC 8544991. PMID 34670656.
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