SNAPC1: Difference between revisions

SNAPC1
Identifiers
Aliases	SNAPC1, PTFgamma, SNAP43, small nuclear RNA activating complex polypeptide 1
External IDs	OMIM: 600591; MGI: 1922877; HomoloGene: 2317; GeneCards: SNAPC1; OMA:SNAPC1 - orthologs
Gene location (Human)
Chr.	Chromosome 14 (human)
End	61,796,428 bp
Gene location (Mouse)
Chr.	Chromosome 12 (mouse)
End	74,035,740 bp
RNA expression pattern
	Top expressed in
	testicle; ; cartilage tissue; ; oocyte; ; secondary oocyte; ; sperm; ; bronchial epithelial cell; ; Achilles tendon; ; tail of epididymis; ; caput epididymis; ; mucosa of paranasal sinus;
	Top expressed in
	otolith organ; ; utricle; ; supraoptic nucleus; ; zygote; ; secondary oocyte; ; pituitary gland; ; hand; ; neural layer of retina; ; paraventricular nucleus of hypothalamus; ; cumulus cell;
	More reference expression data
	More reference expression data
Gene ontology
Molecular function	DNA binding; sequence-specific DNA binding;
Cellular component	snRNA-activating protein complex; nucleus; nucleoplasm; nucleolus;
Biological process	regulation of transcription, DNA-templated; transcription, DNA-templated; snRNA transcription by RNA polymerase III; snRNA transcription by RNA polymerase II;
	Sources:Amigo / QuickGO
Orthologs
	6617
	75627
	ENSG00000023608
	ENSMUSG00000021113
	Q16533
	Q8K0S9
	NM_003082
	NM_178392
	NP_003073
	NP_848479
	Wikidata
View/Edit Human	View/Edit Mouse

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Revision as of 04:41, 26 June 2018

snRNA-activating protein complex subunit 1 is a protein that in humans is encoded by the SNAPC1 gene.^[5]^[6] Template:PBB Summary

Interactions

SNAPC1 has been shown to interact with SNAPC4,^[7] SNAPC3^[7]^[8] and Retinoblastoma protein.^[9]

References

^ ^a ^b ^c GRCh38: Ensembl release 89: ENSG00000023608 – Ensembl, May 2017
^ ^a ^b ^c GRCm38: Ensembl release 89: ENSMUSG00000021113 – Ensembl, May 2017
^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ Maeng JH; Yoon JB (September 1998). "The human PTFgamma/SNAP43 gene: structure, chromosomal location, and identification of a VNTR in 5'-UTR". J Biochem. 124 (1): 23–7. doi:10.1093/oxfordjournals.jbchem.a022085. PMID 9644240.
^ "Entrez Gene: SNAPC1 small nuclear RNA activating complex, polypeptide 1, 43kDa".
^ ^a ^b Ma, B; Hernandez N (February 2001). "A map of protein-protein contacts within the small nuclear RNA-activating protein complex SNAPc". J. Biol. Chem. 276 (7). United States: 5027–35. doi:10.1074/jbc.M009301200. ISSN 0021-9258. PMID 11056176. {{cite journal}}: Cite has empty unknown parameters: |laydate=, |laysummary=, and |laysource= (help)CS1 maint: unflagged free DOI (link)
^ Henry, R W; Ma B; Sadowski C L; Kobayashi R; Hernandez N (Dec 1996). "Cloning and characterization of SNAP50, a subunit of the snRNA-activating protein complex SNAPc". EMBO J. 15 (24). ENGLAND: 7129–36. ISSN 0261-4189. PMC 452539. PMID 9003788. {{cite journal}}: Cite has empty unknown parameters: |laydate=, |laysource=, and |laysummary= (help)
^ Hirsch, H A; Gu L; Henry R W (Dec 2000). "The Retinoblastoma Tumor Suppressor Protein Targets Distinct General Transcription Factors To Regulate RNA Polymerase III Gene Expression". Mol. Cell. Biol. 20 (24). UNITED STATES: 9182–91. doi:10.1128/MCB.20.24.9182-9191.2000. ISSN 0270-7306. PMC 102176. PMID 11094070. {{cite journal}}: Cite has empty unknown parameters: |laysummary=, |laydate=, and |laysource= (help)

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 {{PBB_Further reading
 | citations =
-*{{cite journal  |author1=Henry RW |author2=Sadowski CL |author3=Kobayashi R |author4=Hernandez N |title=A TBP-TAF complex required for transcription of human snRNA genes by RNA polymerase II and III |journal=Nature |volume=374 |issue= 6523 |pages= 653–6 |year= 1995 |pmid= 7715707 |doi= 10.1038/374653a0 }}
+*{{cite journal  |author1=Henry RW |author2=Sadowski CL |author3=Kobayashi R |author4=Hernandez N |title=A TBP-TAF complex required for transcription of human snRNA genes by RNA polymerase II and III |journal=Nature |volume=374 |issue= 6523 |pages= 653–6 |year= 1995 |pmid= 7715707 |doi= 10.1038/374653a0 |bibcode=1995Natur.374..653H }}
 *{{cite journal  |author1=Yoon JB |author2=Roeder RG |title=Cloning of two proximal sequence element-binding transcription factor subunits (gamma and delta) that are required for transcription of small nuclear RNA genes by RNA polymerases II and III and interact with the TATA-binding protein |journal=Mol. Cell. Biol. |volume=16 |issue= 1 |pages= 1–9 |year= 1996 |pmid= 8524284 |doi=10.1016/S1569-2558(08)60061-2  | pmc=230972  | series=Advances in Molecular and Cell Biology  | isbn=978-0-7623-0143-0  }}
 *{{cite journal   |vauthors=Henry RW, Ma B, Sadowski CL, etal |title=Cloning and characterization of SNAP50, a subunit of the snRNA-activating protein complex SNAPc |journal=EMBO J. |volume=15 |issue= 24 |pages= 7129–36 |year= 1997 |pmid= 9003788 |doi=  | pmc=452539  }}
 *{{cite journal  |author1=Ma B |author2=Hernandez N |title=A map of protein-protein contacts within the small nuclear RNA-activating protein complex SNAPc |journal=J. Biol. Chem. |volume=276 |issue= 7 |pages= 5027–35 |year= 2001 |pmid= 11056176 |doi= 10.1074/jbc.M009301200 }}
 *{{cite journal  |author1=Hirsch HA |author2=Gu L |author3=Henry RW |title=The Retinoblastoma Tumor Suppressor Protein Targets Distinct General Transcription Factors To Regulate RNA Polymerase III Gene Expression |journal=Mol. Cell. Biol. |volume=20 |issue= 24 |pages= 9182–91 |year= 2001 |pmid= 11094070 |doi=10.1128/MCB.20.24.9182-9191.2000  | pmc=102176  }}
-*{{cite journal   |vauthors=Strausberg RL, Feingold EA, Grouse LH, etal |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899  | pmc=139241 }}
+*{{cite journal   |vauthors=Strausberg RL, Feingold EA, Grouse LH, etal |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899  | pmc=139241 |bibcode=2002PNAS...9916899M }}
 *{{cite journal   |vauthors=Hinkley CS, Hirsch HA, Gu L, etal |title=The small nuclear RNA-activating protein 190 Myb DNA binding domain stimulates TATA box-binding protein-TATA box recognition |journal=J. Biol. Chem. |volume=278 |issue= 20 |pages= 18649–57 |year= 2003 |pmid= 12621023 |doi= 10.1074/jbc.M204247200 }}
 *{{cite journal   |vauthors=Gerhard DS, Wagner L, Feingold EA, etal |title=The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC) |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121–7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504  | pmc=528928 }}
 *{{cite journal  |author1=Gu L |author2=Esselman WJ |author3=Henry RW |title=Cooperation between small nuclear RNA-activating protein complex (SNAPC) and TATA-box-binding protein antagonizes protein kinase CK2 inhibition of DNA binding by SNAPC |journal=J. Biol. Chem. |volume=280 |issue= 30 |pages= 27697–704 |year= 2005 |pmid= 15955816 |doi= 10.1074/jbc.M503206200 }}
-*{{cite journal   |vauthors=Rual JF, Venkatesan K, Hao T, etal |title=Towards a proteome-scale map of the human protein-protein interaction network |journal=Nature |volume=437 |issue= 7062 |pages= 1173–8 |year= 2005 |pmid= 16189514 |doi= 10.1038/nature04209 }}
+*{{cite journal   |vauthors=Rual JF, Venkatesan K, Hao T, etal |title=Towards a proteome-scale map of the human protein-protein interaction network |journal=Nature |volume=437 |issue= 7062 |pages= 1173–8 |year= 2005 |pmid= 16189514 |doi= 10.1038/nature04209 |bibcode=2005Natur.437.1173R }}
 }}
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