Mild recessive mutations in six Fraser syndrome-related genes cause isolated congenital anomalies of the kidney and urinary tract

J Am Soc Nephrol. 2014 Sep;25(9):1917-22. doi: 10.1681/ASN.2013101103. Epub 2014 Apr 3.

Abstract

Congenital anomalies of the kidney and urinary tract (CAKUT) account for approximately 40% of children with ESRD in the United States. Hitherto, mutations in 23 genes have been described as causing autosomal dominant isolated CAKUT in humans. However, >90% of cases of isolated CAKUT still remain without a molecular diagnosis. Here, we hypothesized that genes mutated in recessive mouse models with the specific CAKUT phenotype of unilateral renal agenesis may also be mutated in humans with isolated CAKUT. We applied next-generation sequencing technology for targeted exon sequencing of 12 recessive murine candidate genes in 574 individuals with isolated CAKUT from 590 families. In 15 of 590 families, we identified recessive mutations in the genes FRAS1, FREM2, GRIP1, FREM1, ITGA8, and GREM1, all of which function in the interaction of the ureteric bud and the metanephric mesenchyme. We show that isolated CAKUT may be caused partially by mutations in recessive genes. Our results also indicate that biallelic missense mutations in the Fraser/MOTA/BNAR spectrum genes cause isolated CAKUT, whereas truncating mutations are found in the multiorgan form of Fraser syndrome. The newly identified recessive biallelic mutations in these six genes represent the molecular cause of isolated CAKUT in 2.5% of the 590 affected families in this study.

Keywords: CAKUT; FRAS1; FREM1; FREM2; Fraser syndrome; GDNF; GREM1; GRIP1; ITGA8; RET; VUR; genetic kidney disease; renal agenesis.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Carrier Proteins / genetics*
  • Congenital Abnormalities / genetics
  • Disease Models, Animal
  • Extracellular Matrix Proteins / genetics*
  • Female
  • Fraser Syndrome / genetics*
  • Genes, Recessive
  • Humans
  • Integrin alpha Chains / genetics*
  • Intercellular Signaling Peptides and Proteins / genetics*
  • Kidney / abnormalities*
  • Kidney Diseases / congenital
  • Kidney Diseases / genetics
  • Male
  • Mice
  • Mice, Mutant Strains
  • Mutation*
  • Nerve Tissue Proteins / genetics*
  • Receptors, Interleukin / genetics*
  • Urinary Tract / abnormalities*
  • Urogenital Abnormalities
  • Vesico-Ureteral Reflux / genetics*

Substances

  • Carrier Proteins
  • Extracellular Matrix Proteins
  • FRAS1 protein, human
  • FREM2 protein, human
  • Frem1 protein, human
  • GREM1 protein, human
  • GRIP1 protein, human
  • ITGA8 protein, human
  • Integrin alpha Chains
  • Intercellular Signaling Peptides and Proteins
  • Nerve Tissue Proteins
  • Receptors, Interleukin

Supplementary concepts

  • Cakut
  • Hereditary renal agenesis