Poly(ADP-ribosyl)ation-dependent Transient Chromatin Decondensation and Histone Displacement following Laser Microirradiation

J Biol Chem. 2016 Jan 22;291(4):1789-1802. doi: 10.1074/jbc.M115.694992. Epub 2015 Nov 11.

Abstract

Chromatin undergoes a rapid ATP-dependent, ATM and H2AX-independent decondensation when DNA damage is introduced by laser microirradiation. Although the detailed mechanism of this decondensation remains to be determined, the kinetics of decondensation are similar to the kinetics of poly(ADP-ribosyl)ation. We used laser microirradiation to introduce DNA strand breaks into living cells expressing a photoactivatable GFP-tagged histone H2B. We find that poly(ADP-ribosyl)ation mediated primarily by poly(ADP-ribose) polymerase 1 (PARP1) is responsible for the rapid decondensation of chromatin at sites of DNA damage. This decondensation of chromatin correlates temporally with the displacement of histones, which is sensitive to PARP inhibition and is transient in nature. Contrary to the predictions of the histone shuttle hypothesis, we did not find that histone H1 accumulated on poly(ADP-ribose) (PAR) in vivo. Rather, histone H1, and to a lessor extent, histones H2A and H2B were rapidly depleted from the sites of PAR accumulation. However, histone H1 returns to chromatin and the chromatin recondenses. Thus, the PARP-dependent relaxation of chromatin closely correlates with histone displacement.

Keywords: DNA damage; DNA damage response; PARG; PARP-1; chromatin; chromatin remodeling; histone H1; histone modification; poly(ADP-ribosyl)ation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Cell Line
  • Chromatin / metabolism*
  • Chromatin / radiation effects*
  • Chromatin Assembly and Disassembly / radiation effects*
  • DNA Damage / radiation effects
  • DNA Repair
  • Fibroblasts / metabolism
  • Fibroblasts / radiation effects
  • Histones / metabolism*
  • Humans
  • Lasers
  • Mice
  • Poly Adenosine Diphosphate Ribose / metabolism
  • Poly(ADP-ribose) Polymerases / metabolism

Substances

  • Chromatin
  • Histones
  • Poly Adenosine Diphosphate Ribose
  • Poly(ADP-ribose) Polymerases