Genome-wide variants of Eurasian facial shape differentiation and a prospective model of DNA based face prediction

J Genet Genomics. 2018 Aug 20;45(8):419-432. doi: 10.1016/j.jgg.2018.07.009. Epub 2018 Aug 16.

Abstract

It is a long-standing question as to which genes define the characteristic facial features among different ethnic groups. In this study, we use Uyghurs, an ancient admixed population to query the genetic bases why Europeans and Han Chinese look different. Facial traits were analyzed based on high-dense 3D facial images; numerous biometric spaces were examined for divergent facial features between European and Han Chinese, ranging from inter-landmark distances to dense shape geometrics. Genome-wide association studies (GWAS) were conducted on a discovery panel of Uyghurs. Six significant loci were identified, four of which, rs1868752, rs118078182, rs60159418 at or near UBASH3B, COL23A1, PCDH7 and rs17868256 were replicated in independent cohorts of Uyghurs or Southern Han Chinese. A prospective model was also developed to predict 3D faces based on top GWAS signals and tested in hypothetic forensic scenarios.

Keywords: Ancestry-divergent phenotypes; Dense 3D facial image; Face prediction; Forensic scenario; Genome-wide association study.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adolescent
  • Adult
  • Asian People / genetics*
  • Cadherins / genetics
  • China
  • Collagen / genetics
  • Europa
  • Face / anatomy & histology*
  • Female
  • Genetic Variation
  • Genome-Wide Association Study*
  • Genotype
  • Humans
  • Male
  • Polymorphism, Single Nucleotide
  • Prospective Studies
  • Protein Tyrosine Phosphatases / genetics
  • Protocadherins
  • White People / genetics*
  • Young Adult

Substances

  • COL23A1 protein, human
  • Cadherins
  • PCDH7 protein, human
  • Protocadherins
  • Collagen
  • Protein Tyrosine Phosphatases
  • UBASH3B protein, human