Structure of the SARS-Unique Domain C From the Bat Coronavirus HKU4

Nat Prod Commun. 2019 May 27;14(5):1934578X19849202. doi: 10.1177/1934578X19849202. eCollection 2019 May.

Abstract

Coronaviruses (CoVs) that cause infections such as severe acute respiratory syndrome (SARS) and Middle East respiratory syndrome phylogenetically originate from bat CoVs. The coronaviral nonstructural protein 3 (nsp3) has been implicated in viral replication, polyprotein cleavage, and host immune interference. We report the structure of the C domain from the SARS-Unique Domain of bat CoV HKU4. The protein has a frataxin fold, consisting of 5 antiparallel β strands packed against 2 α helices. Bioinformatics analyses and nuclear magnetic resonance experiments were conducted to investigate the function of HKU4 C. The results showed that HKU4 C engages in protein-protein interactions with the nearby M domain of nsp3. The HKU4 C residues involved in protein-protein interactions are conserved in group 2c CoVs, indicating a conserved function.

Keywords: MERS; NMR; SARS-unique domain; chemical shift perturbation; coronavirus; functional annotation; non-structural protein.