Systematic Chemogenetic Library Assembly

Cell Chem Biol. 2020 Sep 17;27(9):1124-1129. doi: 10.1016/j.chembiol.2020.07.004. Epub 2020 Jul 23.

Abstract

Chemogenetic libraries, collections of well-defined chemical probes, provide tremendous value to biomedical research but require substantial effort to ensure diversity as well as quality of the contents. We have assembled a chemogenetic library by data mining and crowdsourcing institutional expertise. We are sharing our approach, lessons learned, and disclosing our current collection of 4,185 compounds with their primary annotated gene targets (https://github.com/Novartis/MoaBox). This physical collection is regularly updated and used broadly both within Novartis and in collaboration with external partners.

Keywords: bioinformatics; chemical biology; chemical genetics; chemical informatics; chemical libraries; chemical probes; drug discovery; mechanism of action; phenotypic screening; screening.

Publication types

  • Review

MeSH terms

  • Biological Assay
  • Databases, Chemical
  • Drug Discovery
  • Humans
  • Maschinelles Lernen
  • Molecular Probes / chemistry*
  • Molecular Probes / metabolism
  • Small Molecule Libraries / chemistry*
  • Small Molecule Libraries / metabolism

Substances

  • Molecular Probes
  • Small Molecule Libraries