Comparative Analysis of the PYL Gene Family in Three Ipomoea Species and the Expression Profiling of IbPYL Genes during Abiotic Stress Response in Sweetpotato

Genes (Basel). 2023 Jul 19;14(7):1471. doi: 10.3390/genes14071471.

Abstract

Abscisic acid (ABA), a critical phytohormone that regulates plant development and stress response, is sensed by the ABA receptors PYR/PYL/RCAR (PYLs). The PYL genes have been widely studied in multiple plant species, while a systematic analysis of PYL genes in the genus Ipomoea remains unperformed. Here, a total of 13, 14, and 14 PYLs were identified in Ipomoea batatas, Ipomoea trifida, and Ipomoea triloba, respectively. Fragment duplication was speculated to play prominent roles in Ipomoea PYL gene expansions. These Ipomoea PYLs were classified into three subfamilies via phylogenetic analysis, which was supported by exon-intron structures and conserved motif analyses. Additionally, the interspecies collinearity analysis further depicted a potential evolutionary relationship between them. Moreover, qRT-PCR analysis showed that multiple IbPYLs are highly and differentially responsive to abiotic stress treatments, suggesting their potential roles in sweetpotato stress responses. Taken together, these data provide valuable insights into the PYLs in the genus Ipomoea, which may be useful for their further functional analysis of their defense against environmental changes.

Keywords: ABA receptor; abiotic stress; gene expression; molecular characterization; sweetpotato.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Abscisic Acid / metabolism
  • Ipomoea batatas* / genetics
  • Ipomoea batatas* / metabolism
  • Ipomoea* / genetics
  • Ipomoea* / metabolism
  • Phylogeny
  • Plant Growth Regulators / metabolism
  • Stress, Physiological / genetics

Substances

  • Plant Growth Regulators
  • Abscisic Acid

Grants and funding

This work was supported by the National Natural Science Foundation of China (32171936, 32201703) and Yantai Comprehensive Experimental Station of China Sweet Potato Research System (CRAS-10).