CSF N-Glycomics Using High-Throughput UPLC-ESI Techniques in Alzheimer's Disease

Methods Mol Biol. 2024:2785:37-48. doi: 10.1007/978-1-0716-3774-6_3.

Abstract

In this chapter, we will present a high-throughput method applied in our laboratory for the structural elucidation of the cerebrospinal fluid (CSF) N-glycome. This methodology is based on a commercial equipment developed by WATERS™ to speed up N-deglycosylation and N-glycan labeling of glycoproteins of pharmaceutical and biological interest such as monoclonal antibodies. This analytical kit is sold under the trade name of RapiFluor-MS (RFMS). We have slightly modified the methodology, increasing the glycosylation time and using a high-resolution mass analyzer for the analysis of CSF N-glycans, thus obtaining a high-throughput method (up to 96 samples simultaneously), mass accuracy better than 5 ppm, and the ability to separate and identify isomers.

Keywords: AD; Glyco-biomarkers; High-throughput N-glycomics; N-glycans.

MeSH terms

  • Alzheimer Disease* / cerebrospinal fluid
  • Chromatography, High Pressure Liquid
  • Glycomics* / methods
  • Glycoproteins / chemistry
  • Glycosylation
  • Humans
  • Polysaccharides / chemistry

Substances

  • Glycoproteins
  • Polysaccharides