The Arthropoda-specific Tramtrack group BTB protein domains use previously unknown interface to form hexamers

Elife. 2024 Sep 2:13:e96832. doi: 10.7554/eLife.96832.

Abstract

BTB (bric-a-brack, Tramtrack, and broad complex) is a diverse group of protein-protein interaction domains found within metazoan proteins. Transcription factors contain a dimerizing BTB subtype with a characteristic N-terminal extension. The Tramtrack group (TTK) is a distinct type of BTB domain, which can multimerize. Single-particle cryo-EM microscopy revealed that the TTK-type BTB domains assemble into a hexameric structure consisting of three canonical BTB dimers connected through a previously uncharacterized interface. We demonstrated that the TTK-type BTB domains are found only in Arthropods and have undergone lineage-specific expansion in modern insects. The Drosophila genome encodes 24 transcription factors with TTK-type BTB domains, whereas only four have non-TTK-type BTB domains. Yeast two-hybrid analysis revealed that the TTK-type BTB domains have an unusually broad potential for heteromeric associations presumably through a dimer-dimer interaction interface. Thus, the TTK-type BTB domains are a structurally and functionally distinct group of protein domains specific to Arthropodan transcription factors.

Keywords: Cryo-EM; D. melanogaster; SAXS; molecular biophysics; structural biology; transcription factors.

MeSH terms

  • Animals
  • Arthropods* / genetics
  • Arthropods* / metabolism
  • Cryoelectron Microscopy
  • Drosophila
  • Protein Domains
  • Protein Multimerization*
  • Transcription Factors* / chemistry
  • Transcription Factors* / genetics
  • Transcription Factors* / metabolism
  • Two-Hybrid System Techniques

Substances

  • Transcription Factors