Ingenious dual-circle DNA walker-mediated electrochemical biosensor for rapid and ultrasensitive detection of microRNA

Biosens Bioelectron. 2025 Jan 1:267:116719. doi: 10.1016/j.bios.2024.116719. Epub 2024 Aug 28.

Abstract

In this work, an ingenious dual-circle DNA walker (DCDW) with pretty fast walking speed and high amplification efficiency was developed for rapid and ultrasensitive electrochemical detection of microRNA-221 (miRNA-221) related to liver cancer, combined with the toehold-mediated strand-displacement reactions (TSDRs). Impressively, compared with the traditional DNA walker, the DCDW with unique double-stranded interlocked DNA nanostructure not only possesses higher stability, flexibility, and anti-entanglement ability, but also enables more functional domain in a smaller area, thereby enhancing the local concentration, which can greatly improve the working efficiency. As a validation, the electrochemical biosensor realized rapid and ultrasensitive detection of miRNA-221 with a reaction time of 15 min and detection limit down to 1.9 aM, and had been applied in MHCC97L and HeLa cancer cell lysates, thus providing an innovative insight to design intelligent functional interlocked DNA walkers for ultimate application in the construction of biosensing platform and miRNA detection in biological sample.

Keywords: Dual-circle DNA walker; Electrochemical biosensor; microRNA.

MeSH terms

  • Biosensing Techniques* / methods
  • Cell Line, Tumor
  • DNA* / chemistry
  • DNA* / genetics
  • Electrochemical Techniques* / methods
  • HeLa Cells
  • Humans
  • Limit of Detection*
  • Liver Neoplasms / diagnosis
  • Liver Neoplasms / genetics
  • MicroRNAs* / analysis
  • Nanostructures / chemistry
  • Nucleic Acid Amplification Techniques / methods

Substances

  • MicroRNAs
  • DNA
  • MIRN221 microRNA, human