A hybrid metaheuristic algorithm for antimicrobial peptide toxicity prediction

Sci Rep. 2024 Nov 16;14(1):28260. doi: 10.1038/s41598-024-70462-y.

Abstract

The development of new algorithms can aid researchers and professionals in resolving problems that were once unsolvable or discovering superior solutions to problems that were already settled. By recognizing the importance of continuous research on creating novel algorithms, this paper introduced a hybrid metaheuristic algorithm-h-PSOGNDO, which is a combination of Particle Swarm Optimization (PSO) and Generalized Normal Distribution Optimization (GNDO). The proposed algorithm utilizes the Particle Swarm Optimization's strategy for exploitation and the Generalized Normal Distribution Optimization's global search strategy for exploration. Through this combination, h-PSOGNDO is believed to be an effective algorithm that can promote the advantages of its parents' algorithms. Different assessment methods are used to assess the proposed novel algorithm. First, the h-PSOGNDO is set to conduct experiments on two sets of mathematical functions, including twenty-eight IEEE CEC2017 and ten IEEE CEC2019 benchmark test functions, respectively. Then, the h-PSOGNDO algorithm is applied to a case study on the prediction of antimicrobial peptides' toxicity to evaluate its performance on real-life problems. The statistical findings collected from both the test function sets and the case study show that the h-PSOGNDO algorithm works effectively, proving its astonishing ability to yield highly competitive outcomes for complex problems.

MeSH terms

  • Algorithms*
  • Antimicrobial Peptides* / pharmacology
  • Humans

Substances

  • Antimicrobial Peptides