Volynsky PE - Search Results

1

Interaction of cardiotoxins with membranes: a molecular modeling study.

Efremov RG, Volynsky PE, Nolde DE, Dubovskii PV, Arseniev AS. Efremov RG, et al. Among authors: volynsky pe. Biophys J. 2002 Jul;83(1):144-53. doi: 10.1016/S0006-3495(02)75156-4. Biophys J. 2002. PMID: 12080107 Free PMC article.

2

Recognizing misfolded and distorted protein structures by the assumption-based similarity score.

Golovanov AP, Volynsky PE, Ermakova SB, Arseniev AS. Golovanov AP, et al. Among authors: volynsky pe. Protein Eng. 1999 Jan;12(1):31-40. doi: 10.1093/protein/12.1.31. Protein Eng. 1999. PMID: 10065708

3

Factors important for fusogenic activity of peptides: molecular modeling study of analogs of fusion peptide of influenza virus hemagglutinin.

Efremov RG, Nolde DE, Volynsky PE, Chernyavsky AA, Dubovskii PV, Arseniev AS. Efremov RG, et al. Among authors: volynsky pe. FEBS Lett. 1999 Nov 26;462(1-2):205-10. doi: 10.1016/s0014-5793(99)01505-7. FEBS Lett. 1999. PMID: 10580120 Free article.

4

Monte Carlo simulations of voltage-driven translocation of a signal sequence.

Efremov RG, Volynsky PE, Nolde DE, van Dalen A, de Kruijff B, Arseniev AS. Efremov RG, et al. Among authors: volynsky pe. FEBS Lett. 2002 Aug 28;526(1-3):97-100. doi: 10.1016/s0014-5793(02)03145-9. FEBS Lett. 2002. PMID: 12208512 Free article.

5

Pyrenemethyl ara-uridine-2'-carbamate: a strong interstrand excimer in the major groove of a DNA duplex.

Dioubankova NN, Malakhov AD, Stetsenko DA, Gait MJ, Volynsky PE, Efremov RG, Korshun VA. Dioubankova NN, et al. Among authors: volynsky pe. Chembiochem. 2003 Sep 5;4(9):841-7. doi: 10.1002/cbic.200300678. Chembiochem. 2003. PMID: 12964158

6

Development of the force field parameters for phosphoimidazole and phosphohistidine.

Kosinsky YA, Volynsky PE, Lagant P, Vergoten G, Suzuki E, Arseniev AS, Efremov RG. Kosinsky YA, et al. Among authors: volynsky pe. J Comput Chem. 2004 Aug;25(11):1313-21. doi: 10.1002/jcc.20055. J Comput Chem. 2004. PMID: 15185324

7

Effect of lipid composition on the "membrane response" induced by a fusion peptide.

Volynsky PE, Polyansky AA, Simakov NA, Arseniev AS, Efremov RG. Volynsky PE, et al. Biochemistry. 2005 Nov 8;44(44):14626-37. doi: 10.1021/bi0514562. Biochemistry. 2005. PMID: 16262262

8

Association of transmembrane helices: what determines assembling of a dimer?

Efremov RG, Vereshaga YA, Volynsky PE, Nolde DE, Arseniev AS. Efremov RG, et al. Among authors: volynsky pe. J Comput Aided Mol Des. 2006 Jan;20(1):27-45. doi: 10.1007/s10822-006-9034-6. Epub 2006 May 19. J Comput Aided Mol Des. 2006. PMID: 16775778

9

Role of lipid charge in organization of water/lipid bilayer interface: insights via computer simulations.

Polyansky AA, Volynsky PE, Nolde DE, Arseniev AS, Efremov RG. Polyansky AA, et al. Among authors: volynsky pe. J Phys Chem B. 2005 Aug 11;109(31):15052-9. doi: 10.1021/jp0510185. J Phys Chem B. 2005. PMID: 16852905

10

Spatial structure and activity mechanism of a novel spider antimicrobial peptide.

Dubovskii PV, Volynsky PE, Polyansky AA, Chupin VV, Efremov RG, Arseniev AS. Dubovskii PV, et al. Among authors: volynsky pe. Biochemistry. 2006 Sep 5;45(35):10759-67. doi: 10.1021/bi060635w. Biochemistry. 2006. PMID: 16939228

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