Platt D - Search Results

1

Rigoutsos I, Huynh T, Floratos A, Parida L, Platt D. Rigoutsos I, et al. Among authors: platt d. Nucleic Acids Res. 2002 Sep 1;30(17):3901-16. doi: 10.1093/nar/gkf464. Nucleic Acids Res. 2002. PMID: 12202776 Free PMC article.

2

The emergence of pattern discovery techniques in computational biology.

Rigoutsos I, Floratos A, Parida L, Gao Y, Platt D. Rigoutsos I, et al. Among authors: platt d. Metab Eng. 2000 Jul;2(3):159-77. doi: 10.1006/mben.2000.0151. Metab Eng. 2000. PMID: 11056059 Review.

3

In silico pattern-based analysis of the human cytomegalovirus genome.

Rigoutsos I, Novotny J, Huynh T, Chin-Bow ST, Parida L, Platt D, Coleman D, Shenk T. Rigoutsos I, et al. Among authors: platt d. J Virol. 2003 Apr;77(7):4326-44. doi: 10.1128/jvi.77.7.4326-4344.2003. J Virol. 2003. PMID: 12634390 Free PMC article.

4

The web server of IBM's Bioinformatics and Pattern Discovery group.

Huynh T, Rigoutsos I, Parida L, Platt D, Shibuya T. Huynh T, et al. Among authors: platt d. Nucleic Acids Res. 2003 Jul 1;31(13):3645-50. doi: 10.1093/nar/gkg621. Nucleic Acids Res. 2003. PMID: 12824385 Free PMC article.

5

Global secondary structure packing angle bias in proteins.

Platt DE, Guerra C, Zanotti G, Rigoutsos I. Platt DE, et al. Proteins. 2003 Nov 1;53(2):252-61. doi: 10.1002/prot.10448. Proteins. 2003. PMID: 14517976

6

Short blocks from the noncoding parts of the human genome have instances within nearly all known genes and relate to biological processes.

Rigoutsos I, Huynh T, Miranda K, Tsirigos A, McHardy A, Platt D. Rigoutsos I, et al. Among authors: platt d. Proc Natl Acad Sci U S A. 2006 Apr 25;103(17):6605-10. doi: 10.1073/pnas.0601688103. Epub 2006 Apr 24. Proc Natl Acad Sci U S A. 2006. PMID: 16636294 Free PMC article.

7

Recombination networks as genetic markers in a human variation study of the Old World.

Javed A, Melé M, Pybus M, Zalloua P, Haber M, Comas D, Netea MG, Balanovsky O, Balanovska E, Jin L, Yang Y, Arunkumar G, Pitchappan R, Bertranpetit J, Calafell F, Parida L; Genographic Consortium. Javed A, et al. Hum Genet. 2012 Apr;131(4):601-13. doi: 10.1007/s00439-011-1104-8. Epub 2011 Oct 18. Hum Genet. 2012. PMID: 22006219

8

Effect of sampling on the extent and accuracy of the inferred genetic history of recombining genome.

Platt DE, Utro F, Parida L. Platt DE, et al. Comput Biol Chem. 2014 Jun;50:68-74. doi: 10.1016/j.compbiolchem.2014.01.007. Epub 2014 Jan 23. Comput Biol Chem. 2014. PMID: 24525375

9

Characterizing redescriptions using persistent homology to isolate genetic pathways contributing to pathogenesis.

Platt DE, Basu S, Zalloua PA, Parida L. Platt DE, et al. BMC Syst Biol. 2016 Jan 11;10 Suppl 1(Suppl 1):10. doi: 10.1186/s12918-015-0251-2. BMC Syst Biol. 2016. PMID: 26819062 Free PMC article.

10

Variant analysis of SARS-CoV-2 genomes.

Koyama T, Platt D, Parida L. Koyama T, et al. Among authors: platt d. Bull World Health Organ. 2020 Jul 1;98(7):495-504. doi: 10.2471/BLT.20.253591. Epub 2020 Jun 2. Bull World Health Organ. 2020. PMID: 32742035 Free PMC article.

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