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Antisense transcripts with rice full-length cDNAs.
Osato N, Yamada H, Satoh K, Ooka H, Yamamoto M, Suzuki K, Kawai J, Carninci P, Ohtomo Y, Murakami K, Matsubara K, Kikuchi S, Hayashizaki Y. Osato N, et al. Among authors: kikuchi s. Genome Biol. 2003;5(1):R5. doi: 10.1186/gb-2003-5-1-r5. Epub 2003 Dec 11. Genome Biol. 2003. PMID: 14709177 Free PMC article.
Gene organization in rice revealed by full-length cDNA mapping and gene expression analysis through microarray.
Satoh K, Doi K, Nagata T, Kishimoto N, Suzuki K, Otomo Y, Kawai J, Nakamura M, Hirozane-Kishikawa T, Kanagawa S, Arakawa T, Takahashi-Iida J, Murata M, Ninomiya N, Sasaki D, Fukuda S, Tagami M, Yamagata H, Kurita K, Kamiya K, Yamamoto M, Kikuta A, Bito T, Fujitsuka N, Ito K, Kanamori H, Choi IR, Nagamura Y, Matsumoto T, Murakami K, Matsubara K, Carninci P, Hayashizaki Y, Kikuchi S. Satoh K, et al. Among authors: kikuchi s. PLoS One. 2007 Nov 28;2(11):e1235. doi: 10.1371/journal.pone.0001235. PLoS One. 2007. PMID: 18043742 Free PMC article.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
Rice Full-Length cDNA Consortium; National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team; Kikuchi S, Satoh K, Nagata T, Kawagashira N, Doi K, Kishimoto N, Yazaki J, Ishikawa M, Yamada H, Ooka H, Hotta I, Kojima K, Namiki T, Ohneda E, Yahagi W, Suzuki K, Li CJ, Ohtsuki K, Shishiki T; Foundation of Advancement of International Science Genome Sequencing & Analysis Group; Otomo Y, Murakami K, Iida Y, Sugano S, Fujimura T, Suzuki Y, Tsunoda Y, Kurosaki T, Kodama T, Masuda H, Kobayashi M, Xie Q, Lu M, Narikawa R, Sugiyama A, Mizuno K, Yokomizo S, Niikura J, Ikeda R, Ishibiki J, Kawamata M, Yoshimura A, Miura J, Kusumegi T, Oka M, Ryu R, Ueda M, Matsubara K; RIKEN; Kawai J, Carninci P, Adachi J, Aizawa K, Arakawa T, Fukuda S, Hara A, Hashizume W, Hayatsu N, Imotani K, Ishii Y, Itoh M, Kagawa I, Kondo S, Konno H, Miyazaki A, Osato N, Ota Y, Saito R, Sasaki D, Sato K, Shibata K, Shinagawa A, Shiraki T, Yoshino M, Hayashizaki Y, Yasunishi A. Rice Full-Length cDNA Consortium, et al. Among authors: kikuchi s. Science. 2003 Jul 18;301(5631):376-9. doi: 10.1126/science.1081288. Science. 2003. PMID: 12869764
Transcriptional profiling of genes responsive to abscisic acid and gibberellin in rice: phenotyping and comparative analysis between rice and Arabidopsis.
Yazaki J, Shimatani Z, Hashimoto A, Nagata Y, Fujii F, Kojima K, Suzuki K, Taya T, Tonouchi M, Nelson C, Nakagawa A, Otomo Y, Murakami K, Matsubara K, Kawai J, Carninci P, Hayashizaki Y, Kikuchi S. Yazaki J, et al. Among authors: kikuchi s. Physiol Genomics. 2004 Apr 13;17(2):87-100. doi: 10.1152/physiolgenomics.00201.2003. Physiol Genomics. 2004. PMID: 14982972
Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis thaliana.
Ooka H, Satoh K, Doi K, Nagata T, Otomo Y, Murakami K, Matsubara K, Osato N, Kawai J, Carninci P, Hayashizaki Y, Suzuki K, Kojima K, Takahara Y, Yamamoto K, Kikuchi S. Ooka H, et al. Among authors: kikuchi s. DNA Res. 2003 Dec 31;10(6):239-47. doi: 10.1093/dnares/10.6.239. DNA Res. 2003. PMID: 15029955 Free article.
Genomics approach to abscisic acid- and gibberellin-responsive genes in rice.
Yazaki J, Kishimoto N, Nagata Y, Ishikawa M, Fujii F, Hashimoto A, Shimbo K, Shimatani Z, Kojima K, Suzuki K, Yamamoto M, Honda S, Endo A, Yoshida Y, Sato Y, Takeuchi K, Toyoshima K, Miyamoto C, Wu J, Sasaki T, Sakata K, Yamamoto K, Iba K, Oda T, Otomo Y, Murakami K, Matsubara K, Kawai J, Carninci P, Hayashizaki Y, Kikuchi S. Yazaki J, et al. Among authors: kikuchi s. DNA Res. 2003 Dec 31;10(6):249-61. doi: 10.1093/dnares/10.6.249. DNA Res. 2003. PMID: 15029956 Free article.
Computational analysis suggests that alternative first exons are involved in tissue-specific transcription in rice (Oryza sativa).
Kitagawa N, Washio T, Kosugi S, Yamashita T, Higashi K, Yanagawa H, Higo K, Satoh K, Ohtomo Y, Sunako T, Murakami K, Matsubara K, Kawai J, Carninci P, Hayashizaki Y, Kikuchi S, Tomita M. Kitagawa N, et al. Among authors: kikuchi s. Bioinformatics. 2005 May 1;21(9):1758-63. doi: 10.1093/bioinformatics/bti253. Epub 2005 Jan 12. Bioinformatics. 2005. PMID: 15647298
2,546 results