de Menezes RX - Search Results

1

Intensity-based analysis of two-colour microarrays enables efficient and flexible hybridization designs.

't Hoen PA, Turk R, Boer JM, Sterrenburg E, de Menezes RX, van Ommen GJ, den Dunnen JT. 't Hoen PA, et al. Among authors: de menezes rx. Nucleic Acids Res. 2004 Feb 24;32(4):e41. doi: 10.1093/nar/gnh038. Nucleic Acids Res. 2004. PMID: 14982960 Free PMC article.

2

Deep sequencing-based expression analysis shows major advances in robustness, resolution and inter-lab portability over five microarray platforms.

't Hoen PA, Ariyurek Y, Thygesen HH, Vreugdenhil E, Vossen RH, de Menezes RX, Boer JM, van Ommen GJ, den Dunnen JT. 't Hoen PA, et al. Among authors: de menezes rx. Nucleic Acids Res. 2008 Dec;36(21):e141. doi: 10.1093/nar/gkn705. Epub 2008 Oct 15. Nucleic Acids Res. 2008. PMID: 18927111 Free PMC article.

3

mRNA degradation controls differentiation state-dependent differences in transcript and splice variant abundance.

't Hoen PA, Hirsch M, de Meijer EJ, de Menezes RX, van Ommen GJ, den Dunnen JT. 't Hoen PA, et al. Among authors: de menezes rx, de meijer ej. Nucleic Acids Res. 2011 Jan;39(2):556-66. doi: 10.1093/nar/gkq790. Epub 2010 Sep 17. Nucleic Acids Res. 2011. PMID: 20852259 Free PMC article.

4

Gene expression variation between mouse inbred strains.

Turk R, 't Hoen PA, Sterrenburg E, de Menezes RX, de Meijer EJ, Boer JM, van Ommen GJ, den Dunnen JT. Turk R, et al. Among authors: de menezes rx, de meijer ej. BMC Genomics. 2004 Aug 18;5(1):57. doi: 10.1186/1471-2164-5-57. BMC Genomics. 2004. PMID: 15317656 Free PMC article.

5

Genomic profiling by DNA amplification of laser capture microdissected tissues and array CGH.

Cardoso J, Molenaar L, de Menezes RX, Rosenberg C, Morreau H, Möslein G, Fodde R, Boer JM. Cardoso J, et al. Among authors: de menezes rx. Nucleic Acids Res. 2004 Oct 28;32(19):e146. doi: 10.1093/nar/gnh142. Nucleic Acids Res. 2004. PMID: 15514107 Free PMC article.

6

Microarray data analysis: a hierarchical T-test to handle heteroscedasticity.

de Menezes RX, Boer JM, van Houwelingen HC. de Menezes RX, et al. Appl Bioinformatics. 2004;3(4):229-35. Appl Bioinformatics. 2004. PMID: 15702953

7

Gene expression profiling highlights defective myogenesis in DMD patients and a possible role for bone morphogenetic protein 4.

Sterrenburg E, van der Wees CG, White SJ, Turk R, de Menezes RX, van Ommen GJ, den Dunnen JT, 't Hoen PA. Sterrenburg E, et al. Among authors: de menezes rx. Neurobiol Dis. 2006 Jul;23(1):228-36. doi: 10.1016/j.nbd.2006.03.004. Epub 2006 May 6. Neurobiol Dis. 2006. PMID: 16679024

8

Can subtle changes in gene expression be consistently detected with different microarray platforms?

Pedotti P, 't Hoen PA, Vreugdenhil E, Schenk GJ, Vossen RH, Ariyurek Y, de Hollander M, Kuiper R, van Ommen GJ, den Dunnen JT, Boer JM, de Menezes RX. Pedotti P, et al. Among authors: de hollander m, de menezes rx. BMC Genomics. 2008 Mar 10;9:124. doi: 10.1186/1471-2164-9-124. BMC Genomics. 2008. PMID: 18331641 Free PMC article.

9

General power and sample size calculations for high-dimensional genomic data.

van Iterson M, van de Wiel MA, Boer JM, de Menezes RX. van Iterson M, et al. Among authors: de menezes rx. Stat Appl Genet Mol Biol. 2013 Aug;12(4):449-67. doi: 10.1515/sagmb-2012-0046. Stat Appl Genet Mol Biol. 2013. PMID: 23934609

10

Common pathological mechanisms in mouse models for muscular dystrophies.

Turk R, Sterrenburg E, van der Wees CG, de Meijer EJ, de Menezes RX, Groh S, Campbell KP, Noguchi S, van Ommen GJ, den Dunnen JT, 't Hoen PA. Turk R, et al. Among authors: de menezes rx, de meijer ej. FASEB J. 2006 Jan;20(1):127-9. doi: 10.1096/fj.05-4678fje. Epub 2005 Nov 23. FASEB J. 2006. PMID: 16306063

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