Green R - Search Results

1

Suz12 binds to silenced regions of the genome in a cell-type-specific manner.

Squazzo SL, O'Geen H, Komashko VM, Krig SR, Jin VX, Jang SW, Margueron R, Reinberg D, Green R, Farnham PJ. Squazzo SL, et al. Among authors: green r. Genome Res. 2006 Jul;16(7):890-900. doi: 10.1101/gr.5306606. Epub 2006 Jun 2. Genome Res. 2006. PMID: 16751344 Free PMC article.

2

Unbiased location analysis of E2F1-binding sites suggests a widespread role for E2F1 in the human genome.

Bieda M, Xu X, Singer MA, Green R, Farnham PJ. Bieda M, et al. Among authors: green r. Genome Res. 2006 May;16(5):595-605. doi: 10.1101/gr.4887606. Epub 2006 Apr 10. Genome Res. 2006. PMID: 16606705 Free PMC article.

3

A computational genomics approach to identify cis-regulatory modules from chromatin immunoprecipitation microarray data--a case study using E2F1.

Jin VX, Rabinovich A, Squazzo SL, Green R, Farnham PJ. Jin VX, et al. Among authors: green r. Genome Res. 2006 Dec;16(12):1585-95. doi: 10.1101/gr.5520206. Epub 2006 Oct 19. Genome Res. 2006. PMID: 17053090 Free PMC article.

4

Comparison of sample preparation methods for ChIP-chip assays.

O'Geen H, Nicolet CM, Blahnik K, Green R, Farnham PJ. O'Geen H, et al. Among authors: green r. Biotechniques. 2006 Nov;41(5):577-80. doi: 10.2144/000112268. Biotechniques. 2006. PMID: 17140114 Free PMC article.

5

Identification of genes directly regulated by the oncogene ZNF217 using chromatin immunoprecipitation (ChIP)-chip assays.

Krig SR, Jin VX, Bieda MC, O'Geen H, Yaswen P, Green R, Farnham PJ. Krig SR, et al. Among authors: green r. J Biol Chem. 2007 Mar 30;282(13):9703-9712. doi: 10.1074/jbc.M611752200. Epub 2007 Jan 26. J Biol Chem. 2007. PMID: 17259635 Free PMC article.

6

Genome-wide analysis of KAP1 binding suggests autoregulation of KRAB-ZNFs.

O'Geen H, Squazzo SL, Iyengar S, Blahnik K, Rinn JL, Chang HY, Green R, Farnham PJ. O'Geen H, et al. Among authors: green r. PLoS Genet. 2007 Jun;3(6):e89. doi: 10.1371/journal.pgen.0030089. Epub 2007 Apr 19. PLoS Genet. 2007. PMID: 17542650 Free PMC article.

7

Identification of an OCT4 and SRY regulatory module using integrated computational and experimental genomics approaches.

Jin VX, O'Geen H, Iyengar S, Green R, Farnham PJ. Jin VX, et al. Among authors: green r. Genome Res. 2007 Jun;17(6):807-17. doi: 10.1101/gr.6006107. Genome Res. 2007. PMID: 17567999 Free PMC article.

8

A comprehensive ChIP-chip analysis of E2F1, E2F4, and E2F6 in normal and tumor cells reveals interchangeable roles of E2F family members.

Xu X, Bieda M, Jin VX, Rabinovich A, Oberley MJ, Green R, Farnham PJ. Xu X, et al. Among authors: green r. Genome Res. 2007 Nov;17(11):1550-61. doi: 10.1101/gr.6783507. Epub 2007 Oct 1. Genome Res. 2007. PMID: 17908821 Free PMC article.

9

Using ChIP-chip technology to reveal common principles of transcriptional repression in normal and cancer cells.

Komashko VM, Acevedo LG, Squazzo SL, Iyengar SS, Rabinovich A, O'Geen H, Green R, Farnham PJ. Komashko VM, et al. Among authors: green r. Genome Res. 2008 Apr;18(4):521-32. doi: 10.1101/gr.074609.107. Epub 2008 Mar 17. Genome Res. 2008. PMID: 18347325 Free PMC article.

10

Analysis of the mechanisms mediating tumor-specific changes in gene expression in human liver tumors.

Acevedo LG, Bieda M, Green R, Farnham PJ. Acevedo LG, et al. Among authors: green r. Cancer Res. 2008 Apr 15;68(8):2641-51. doi: 10.1158/0008-5472.CAN-07-5590. Cancer Res. 2008. PMID: 18413731 Free PMC article.

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