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A survey of essential gene function in the yeast cell division cycle.
Yu L, Peña Castillo L, Mnaimneh S, Hughes TR, Brown GW. Yu L, et al. Among authors: pena castillo l. Mol Biol Cell. 2006 Nov;17(11):4736-47. doi: 10.1091/mbc.e06-04-0368. Epub 2006 Aug 30. Mol Biol Cell. 2006. PMID: 16943325 Free PMC article.
A library of yeast transcription factor motifs reveals a widespread function for Rsc3 in targeting nucleosome exclusion at promoters.
Badis G, Chan ET, van Bakel H, Pena-Castillo L, Tillo D, Tsui K, Carlson CD, Gossett AJ, Hasinoff MJ, Warren CL, Gebbia M, Talukder S, Yang A, Mnaimneh S, Terterov D, Coburn D, Li Yeo A, Yeo ZX, Clarke ND, Lieb JD, Ansari AZ, Nislow C, Hughes TR. Badis G, et al. Among authors: pena castillo l. Mol Cell. 2008 Dec 26;32(6):878-87. doi: 10.1016/j.molcel.2008.11.020. Mol Cell. 2008. PMID: 19111667 Free PMC article.
A critical assessment of Mus musculus gene function prediction using integrated genomic evidence.
Peña-Castillo L, Tasan M, Myers CL, Lee H, Joshi T, Zhang C, Guan Y, Leone M, Pagnani A, Kim WK, Krumpelman C, Tian W, Obozinski G, Qi Y, Mostafavi S, Lin GN, Berriz GF, Gibbons FD, Lanckriet G, Qiu J, Grant C, Barutcuoglu Z, Hill DP, Warde-Farley D, Grouios C, Ray D, Blake JA, Deng M, Jordan MI, Noble WS, Morris Q, Klein-Seetharaman J, Bar-Joseph Z, Chen T, Sun F, Troyanskaya OG, Marcotte EM, Xu D, Hughes TR, Roth FP. Peña-Castillo L, et al. Genome Biol. 2008;9 Suppl 1(Suppl 1):S2. doi: 10.1186/gb-2008-9-s1-s2. Epub 2008 Jun 27. Genome Biol. 2008. PMID: 18613946 Free PMC article.
Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences.
Berger MF, Badis G, Gehrke AR, Talukder S, Philippakis AA, Peña-Castillo L, Alleyne TM, Mnaimneh S, Botvinnik OB, Chan ET, Khalid F, Zhang W, Newburger D, Jaeger SA, Morris QD, Bulyk ML, Hughes TR. Berger MF, et al. Among authors: pena castillo l. Cell. 2008 Jun 27;133(7):1266-76. doi: 10.1016/j.cell.2008.05.024. Cell. 2008. PMID: 18585359 Free PMC article.
37 results