Berdis AJ - Search Results

1

Recent developments in the mechanistic enzymology of the ATP-dependent Lon protease from Escherichia coli: highlights from kinetic studies.

Lee I, Berdis AJ, Suzuki CK. Lee I, et al. Among authors: berdis aj. Mol Biosyst. 2006 Oct;2(10):477-83. doi: 10.1039/b609936j. Epub 2006 Aug 24. Mol Biosyst. 2006. PMID: 17216028 Review.

2

A cell cycle-regulated adenine DNA methyltransferase from Caulobacter crescentus processively methylates GANTC sites on hemimethylated DNA.

Berdis AJ, Lee I, Coward JK, Stephens C, Wright R, Shapiro L, Benkovic SJ. Berdis AJ, et al. Proc Natl Acad Sci U S A. 1998 Mar 17;95(6):2874-9. doi: 10.1073/pnas.95.6.2874. Proc Natl Acad Sci U S A. 1998. PMID: 9501183 Free PMC article.

3

Adenosine triphosphate-dependent degradation of a fluorescent lambda N substrate mimic by Lon protease.

Lee I, Berdis AJ. Lee I, et al. Among authors: berdis aj. Anal Biochem. 2001 Apr 1;291(1):74-83. doi: 10.1006/abio.2001.4988. Anal Biochem. 2001. PMID: 11262158

4

Evaluating the contributions of desolvation and base-stacking during translesion DNA synthesis.

Zhang X, Lee I, Berdis AJ. Zhang X, et al. Among authors: berdis aj. Org Biomol Chem. 2004 Jun 21;2(12):1703-11. doi: 10.1039/b401732c. Epub 2004 May 19. Org Biomol Chem. 2004. PMID: 15188037

5

Monitoring the timing of ATP hydrolysis with activation of peptide cleavage in Escherichia coli Lon by transient kinetics.

Vineyard D, Patterson-Ward J, Berdis AJ, Lee I. Vineyard D, et al. Among authors: berdis aj. Biochemistry. 2005 Feb 8;44(5):1671-82. doi: 10.1021/bi048618z. Biochemistry. 2005. PMID: 15683251

6

The use of nonnatural nucleotides to probe the contributions of shape complementarity and pi-electron surface area during DNA polymerization.

Zhang X, Lee I, Berdis AJ. Zhang X, et al. Among authors: berdis aj. Biochemistry. 2005 Oct 4;44(39):13101-10. doi: 10.1021/bi050585f. Biochemistry. 2005. PMID: 16185078

7

A potential chemotherapeutic strategy for the selective inhibition of promutagenic DNA synthesis by nonnatural nucleotides.

Zhang X, Lee I, Berdis AJ. Zhang X, et al. Among authors: berdis aj. Biochemistry. 2005 Oct 4;44(39):13111-21. doi: 10.1021/bi050584n. Biochemistry. 2005. PMID: 16185079

8

Hydrophobicity, shape, and pi-electron contributions during translesion DNA synthesis.

Zhang X, Lee I, Zhou X, Berdis AJ. Zhang X, et al. Among authors: berdis aj. J Am Chem Soc. 2006 Jan 11;128(1):143-9. doi: 10.1021/ja0546830. J Am Chem Soc. 2006. PMID: 16390141

9

Rational attempts to optimize non-natural nucleotides for selective incorporation opposite an abasic site.

Zhang X, Donnelly A, Lee I, Berdis AJ. Zhang X, et al. Among authors: berdis aj. Biochemistry. 2006 Nov 7;45(44):13293-303. doi: 10.1021/bi060418v. Biochemistry. 2006. PMID: 17073450

10

Fluorescent analysis of translesion DNA synthesis by using a novel, non-natural nucleotide analogue.

Lee I, Berdis A. Lee I, et al. Chembiochem. 2006 Dec;7(12):1990-7. doi: 10.1002/cbic.200600128. Chembiochem. 2006. PMID: 17091513

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