Krishna S - Search Results

1

UV-induced mutagenesis in Escherichia coli SOS response: a quantitative model.

Krishna S, Maslov S, Sneppen K. Krishna S, et al. PLoS Comput Biol. 2007 Mar 16;3(3):e41. doi: 10.1371/journal.pcbi.0030041. Epub 2007 Jan 16. PLoS Comput Biol. 2007. PMID: 17367202 Free PMC article.

2

Relation of intracellular signal levels and promoter activities in the gal regulon of Escherichia coli.

Krishna S, Orosz L, Sneppen K, Adhya S, Semsey S. Krishna S, et al. J Mol Biol. 2009 Aug 28;391(4):671-8. doi: 10.1016/j.jmb.2009.06.043. Epub 2009 Jun 23. J Mol Biol. 2009. PMID: 19559028 Free PMC article.

3

Minimal gene regulatory circuits that can count like bacteriophage lambda.

Avlund M, Dodd IB, Sneppen K, Krishna S. Avlund M, et al. Among authors: krishna s. J Mol Biol. 2009 Dec 11;394(4):681-93. doi: 10.1016/j.jmb.2009.09.053. Epub 2009 Sep 28. J Mol Biol. 2009. PMID: 19796646

4

Structure and function of negative feedback loops at the interface of genetic and metabolic networks.

Krishna S, Andersson AM, Semsey S, Sneppen K. Krishna S, et al. Nucleic Acids Res. 2006 May 9;34(8):2455-62. doi: 10.1093/nar/gkl140. Print 2006. Nucleic Acids Res. 2006. PMID: 16684993 Free PMC article.

5

Minimal model of spiky oscillations in NF-kappaB signaling.

Krishna S, Jensen MH, Sneppen K. Krishna S, et al. Proc Natl Acad Sci U S A. 2006 Jul 18;103(29):10840-5. doi: 10.1073/pnas.0604085103. Epub 2006 Jul 7. Proc Natl Acad Sci U S A. 2006. PMID: 16829571 Free PMC article.

6

Genetic regulation of fluxes: iron homeostasis of Escherichia coli.

Semsey S, Andersson AM, Krishna S, Jensen MH, Massé E, Sneppen K. Semsey S, et al. Among authors: krishna s. Nucleic Acids Res. 2006;34(17):4960-7. doi: 10.1093/nar/gkl627. Epub 2006 Sep 18. Nucleic Acids Res. 2006. PMID: 16982641 Free PMC article.

7

Efficient degradation and expression prioritization with small RNAs.

Mitarai N, Andersson AM, Krishna S, Semsey S, Sneppen K. Mitarai N, et al. Among authors: krishna s. Phys Biol. 2007 Oct 2;4(3):164-71. doi: 10.1088/1478-3975/4/3/003. Phys Biol. 2007. PMID: 17928655

8

Direct and indirect effects in the regulation of overlapping promoters.

Bendtsen KM, Erdossy J, Csiszovszki Z, Svenningsen SL, Sneppen K, Krishna S, Semsey S. Bendtsen KM, et al. Among authors: krishna s. Nucleic Acids Res. 2011 Sep 1;39(16):6879-85. doi: 10.1093/nar/gkr390. Epub 2011 May 23. Nucleic Acids Res. 2011. PMID: 21609952 Free PMC article.

9

Coexistence of phage and bacteria on the boundary of self-organized refuges.

Heilmann S, Sneppen K, Krishna S. Heilmann S, et al. Among authors: krishna s. Proc Natl Acad Sci U S A. 2012 Jul 31;109(31):12828-33. doi: 10.1073/pnas.1200771109. Epub 2012 Jul 17. Proc Natl Acad Sci U S A. 2012. PMID: 22807479 Free PMC article.

10

Network models of phage-bacteria coevolution.

Rosvall M, Dodd IB, Krishna S, Sneppen K. Rosvall M, et al. Among authors: krishna s. Phys Rev E Stat Nonlin Soft Matter Phys. 2006 Dec;74(6 Pt 2):066105. doi: 10.1103/PhysRevE.74.066105. Epub 2006 Dec 8. Phys Rev E Stat Nonlin Soft Matter Phys. 2006. PMID: 17280119

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