Dobbs D - Search Results

1

Exploring inconsistencies in genome-wide protein function annotations: a machine learning approach.

Andorf C, Dobbs D, Honavar V. Andorf C, et al. Among authors: dobbs d. BMC Bioinformatics. 2007 Aug 3;8:284. doi: 10.1186/1471-2105-8-284. BMC Bioinformatics. 2007. PMID: 17683567 Free PMC article.

2

Glycosylation site prediction using ensembles of Support Vector Machine classifiers.

Caragea C, Sinapov J, Silvescu A, Dobbs D, Honavar V. Caragea C, et al. Among authors: dobbs d. BMC Bioinformatics. 2007 Nov 9;8:438. doi: 10.1186/1471-2105-8-438. BMC Bioinformatics. 2007. PMID: 17996106 Free PMC article.

3

Protein-RNA interface residue prediction using machine learning: an assessment of the state of the art.

Walia RR, Caragea C, Lewis BA, Towfic F, Terribilini M, El-Manzalawy Y, Dobbs D, Honavar V. Walia RR, et al. Among authors: dobbs d. BMC Bioinformatics. 2012 May 10;13:89. doi: 10.1186/1471-2105-13-89. BMC Bioinformatics. 2012. PMID: 22574904 Free PMC article.

4

HomPPI: a class of sequence homology based protein-protein interface prediction methods.

Xue LC, Dobbs D, Honavar V. Xue LC, et al. Among authors: dobbs d. BMC Bioinformatics. 2011 Jun 17;12:244. doi: 10.1186/1471-2105-12-244. BMC Bioinformatics. 2011. PMID: 21682895 Free PMC article.

5

A two-stage classifier for identification of protein-protein interface residues.

Yan C, Dobbs D, Honavar V. Yan C, et al. Among authors: dobbs d. Bioinformatics. 2004 Aug 4;20 Suppl 1:i371-8. doi: 10.1093/bioinformatics/bth920. Bioinformatics. 2004. PMID: 15262822

6

Predicting binding sites of hydrolase-inhibitor complexes by combining several methods.

Sen TZ, Kloczkowski A, Jernigan RL, Yan C, Honavar V, Ho KM, Wang CZ, Ihm Y, Cao H, Gu X, Dobbs D. Sen TZ, et al. Among authors: dobbs d. BMC Bioinformatics. 2004 Dec 17;5:205. doi: 10.1186/1471-2105-5-205. BMC Bioinformatics. 2004. PMID: 15606919 Free PMC article.

7

Predicting DNA-binding sites of proteins from amino acid sequence.

Yan C, Terribilini M, Wu F, Jernigan RL, Dobbs D, Honavar V. Yan C, et al. Among authors: dobbs d. BMC Bioinformatics. 2006 May 19;7:262. doi: 10.1186/1471-2105-7-262. BMC Bioinformatics. 2006. PMID: 16712732 Free PMC article.

8

Mixture of experts models to exploit global sequence similarity on biomolecular sequence labeling.

Caragea C, Sinapov J, Dobbs D, Honavar V. Caragea C, et al. Among authors: dobbs d. BMC Bioinformatics. 2009 Apr 29;10 Suppl 4(Suppl 4):S4. doi: 10.1186/1471-2105-10-S4-S4. BMC Bioinformatics. 2009. PMID: 19426452 Free PMC article.

9

Predicting flexible length linear B-cell epitopes.

El-Manzalawy Y, Dobbs D, Honavar V. El-Manzalawy Y, et al. Among authors: dobbs d. Comput Syst Bioinformatics Conf. 2008;7:121-32. Comput Syst Bioinformatics Conf. 2008. PMID: 19642274 Free PMC article.

10

Predicting RNA-protein interactions using only sequence information.

Muppirala UK, Honavar VG, Dobbs D. Muppirala UK, et al. Among authors: dobbs d. BMC Bioinformatics. 2011 Dec 22;12:489. doi: 10.1186/1471-2105-12-489. BMC Bioinformatics. 2011. PMID: 22192482 Free PMC article.

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