Raes J - Search Results

1

Get the most out of your metagenome: computational analysis of environmental sequence data.

Raes J, Foerstner KU, Bork P. Raes J, et al. Curr Opin Microbiol. 2007 Oct;10(5):490-8. doi: 10.1016/j.mib.2007.09.001. Epub 2007 Oct 23. Curr Opin Microbiol. 2007. PMID: 17936679 Review.

2

Nonsense-mediated mRNA decay factors act in concert to regulate common mRNA targets.

Rehwinkel J, Letunic I, Raes J, Bork P, Izaurralde E. Rehwinkel J, et al. Among authors: raes j. RNA. 2005 Oct;11(10):1530-44. doi: 10.1261/rna.2160905. RNA. 2005. PMID: 16199763 Free PMC article.

3

Prediction of effective genome size in metagenomic samples.

Raes J, Korbel JO, Lercher MJ, von Mering C, Bork P. Raes J, et al. Genome Biol. 2007;8(1):R10. doi: 10.1186/gb-2007-8-1-r10. Genome Biol. 2007. PMID: 17224063 Free PMC article.

4

Quantitative phylogenetic assessment of microbial communities in diverse environments.

von Mering C, Hugenholtz P, Raes J, Tringe SG, Doerks T, Jensen LJ, Ward N, Bork P. von Mering C, et al. Among authors: raes j. Science. 2007 Feb 23;315(5815):1126-30. doi: 10.1126/science.1133420. Epub 2007 Feb 1. Science. 2007. PMID: 17272687 Free article.

5

Protein function space: viewing the limits or limited by our view?

Raes J, Harrington ED, Singh AH, Bork P. Raes J, et al. Curr Opin Struct Biol. 2007 Jun;17(3):362-9. doi: 10.1016/j.sbi.2007.05.010. Epub 2007 Jun 15. Curr Opin Struct Biol. 2007. PMID: 17574832 Review.

6

Quantitative assessment of protein function prediction from metagenomics shotgun sequences.

Harrington ED, Singh AH, Doerks T, Letunic I, von Mering C, Jensen LJ, Raes J, Bork P. Harrington ED, et al. Among authors: raes j. Proc Natl Acad Sci U S A. 2007 Aug 28;104(35):13913-8. doi: 10.1073/pnas.0702636104. Epub 2007 Aug 23. Proc Natl Acad Sci U S A. 2007. PMID: 17717083 Free PMC article.

7

Millimeter-scale genetic gradients and community-level molecular convergence in a hypersaline microbial mat.

Kunin V, Raes J, Harris JK, Spear JR, Walker JJ, Ivanova N, von Mering C, Bebout BM, Pace NR, Bork P, Hugenholtz P. Kunin V, et al. Among authors: raes j. Mol Syst Biol. 2008;4:198. doi: 10.1038/msb.2008.35. Epub 2008 Jun 3. Mol Syst Biol. 2008. PMID: 18523433 Free PMC article.

8

Molecular eco-systems biology: towards an understanding of community function.

Raes J, Bork P. Raes J, et al. Nat Rev Microbiol. 2008 Sep;6(9):693-9. doi: 10.1038/nrmicro1935. Nat Rev Microbiol. 2008. PMID: 18587409 Review.

9

A molecular study of microbe transfer between distant environments.

Hooper SD, Raes J, Foerstner KU, Harrington ED, Dalevi D, Bork P. Hooper SD, et al. Among authors: raes j. PLoS One. 2008 Jul 9;3(7):e2607. doi: 10.1371/journal.pone.0002607. PLoS One. 2008. PMID: 18612393 Free PMC article.

10

Discovering functional novelty in metagenomes: examples from light-mediated processes.

Singh AH, Doerks T, Letunic I, Raes J, Bork P. Singh AH, et al. Among authors: raes j. J Bacteriol. 2009 Jan;191(1):32-41. doi: 10.1128/JB.01084-08. Epub 2008 Oct 10. J Bacteriol. 2009. PMID: 18849420 Free PMC article. Review.

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