Ioerger TR - Search Results

1

Automated structure solution with the PHENIX suite.

Zwart PH, Afonine PV, Grosse-Kunstleve RW, Hung LW, Ioerger TR, McCoy AJ, McKee E, Moriarty NW, Read RJ, Sacchettini JC, Sauter NK, Storoni LC, Terwilliger TC, Adams PD. Zwart PH, et al. Among authors: ioerger tr. Methods Mol Biol. 2008;426:419-35. doi: 10.1007/978-1-60327-058-8_28. Methods Mol Biol. 2008. PMID: 18542881 Free article.

2

TEXTAL: a pattern recognition system for interpreting electron density maps.

Ioerger TR, Holton T, Christopher JA, Sacchettini JC. Ioerger TR, et al. Proc Int Conf Intell Syst Mol Biol. 1999:130-7. Proc Int Conf Intell Syst Mol Biol. 1999. PMID: 10786295

3

Determining protein structure from electron-density maps using pattern matching.

Holton T, Ioerger TR, Christopher JA, Sacchettini JC. Holton T, et al. Among authors: ioerger tr. Acta Crystallogr D Biol Crystallogr. 2000 Jun;56(Pt 6):722-34. doi: 10.1107/s0907444900003450. Acta Crystallogr D Biol Crystallogr. 2000. PMID: 10818349

4

PHENIX: building new software for automated crystallographic structure determination.

Adams PD, Grosse-Kunstleve RW, Hung LW, Ioerger TR, McCoy AJ, Moriarty NW, Read RJ, Sacchettini JC, Sauter NK, Terwilliger TC. Adams PD, et al. Among authors: ioerger tr. Acta Crystallogr D Biol Crystallogr. 2002 Nov;58(Pt 11):1948-54. doi: 10.1107/s0907444902016657. Epub 2002 Oct 21. Acta Crystallogr D Biol Crystallogr. 2002. PMID: 12393927

5

Automatic modeling of protein backbones in electron-density maps via prediction of Calpha coordinates.

Ioerger TR, Sacchettini JC. Ioerger TR, et al. Acta Crystallogr D Biol Crystallogr. 2002 Dec;58(Pt 12):2043-54. doi: 10.1107/s0907444902016724. Epub 2002 Nov 23. Acta Crystallogr D Biol Crystallogr. 2002. PMID: 12454463

6

Recent developments in the PHENIX software for automated crystallographic structure determination.

Adams PD, Gopal K, Grosse-Kunstleve RW, Hung LW, Ioerger TR, McCoy AJ, Moriarty NW, Pai RK, Read RJ, Romo TD, Sacchettini JC, Sauter NK, Storoni LC, Terwilliger TC. Adams PD, et al. Among authors: ioerger tr. J Synchrotron Radiat. 2004 Jan 1;11(Pt 1):53-5. doi: 10.1107/s0909049503024130. Epub 2003 Nov 28. J Synchrotron Radiat. 2004. PMID: 14646133

7

TEXTAL system: artificial intelligence techniques for automated protein model building.

Ioerger TR, Sacchettini JC. Ioerger TR, et al. Methods Enzymol. 2003;374:244-70. doi: 10.1016/S0076-6879(03)74012-9. Methods Enzymol. 2003. PMID: 14696377 No abstract available.

8

Crystal structure of circadian clock protein KaiA from Synechococcus elongatus.

Ye S, Vakonakis I, Ioerger TR, LiWang AC, Sacchettini JC. Ye S, et al. Among authors: ioerger tr. J Biol Chem. 2004 May 7;279(19):20511-8. doi: 10.1074/jbc.M400077200. Epub 2004 Mar 8. J Biol Chem. 2004. PMID: 15007067 Free article.

9

Determining relevant features to recognize electron density patterns in x-ray protein crystallography.

Gopal K, Romo TD, Sacchettini JC, Ioerger TR. Gopal K, et al. Among authors: ioerger tr. J Bioinform Comput Biol. 2005 Jun;3(3):645-76. doi: 10.1142/s0219720005001272. J Bioinform Comput Biol. 2005. PMID: 16108088

10

FINDMOL: automated identification of macromolecules in electron-density maps.

McKee EW, Kanbi LD, Childs KL, Grosse-Kunstleve RW, Adams PD, Sacchettini JC, Ioerger TR. McKee EW, et al. Among authors: ioerger tr. Acta Crystallogr D Biol Crystallogr. 2005 Nov;61(Pt 11):1514-20. doi: 10.1107/S0907444905027332. Epub 2005 Oct 19. Acta Crystallogr D Biol Crystallogr. 2005. PMID: 16239729

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