Hamady M - Search Results

1

Microbial community profiling for human microbiome projects: Tools, techniques, and challenges.

Hamady M, Knight R. Hamady M, et al. Genome Res. 2009 Jul;19(7):1141-52. doi: 10.1101/gr.085464.108. Epub 2009 Apr 21. Genome Res. 2009. PMID: 19383763 Free PMC article. Review.

2

UniFrac--an online tool for comparing microbial community diversity in a phylogenetic context.

Lozupone C, Hamady M, Knight R. Lozupone C, et al. Among authors: hamady m. BMC Bioinformatics. 2006 Aug 7;7:371. doi: 10.1186/1471-2105-7-371. BMC Bioinformatics. 2006. PMID: 16893466 Free PMC article.

3

Quantitative and qualitative beta diversity measures lead to different insights into factors that structure microbial communities.

Lozupone CA, Hamady M, Kelley ST, Knight R. Lozupone CA, et al. Among authors: hamady m. Appl Environ Microbiol. 2007 Mar;73(5):1576-85. doi: 10.1128/AEM.01996-06. Epub 2007 Jan 12. Appl Environ Microbiol. 2007. PMID: 17220268 Free PMC article.

4

Short pyrosequencing reads suffice for accurate microbial community analysis.

Liu Z, Lozupone C, Hamady M, Bushman FD, Knight R. Liu Z, et al. Among authors: hamady m. Nucleic Acids Res. 2007;35(18):e120. doi: 10.1093/nar/gkm541. Epub 2007 Sep 18. Nucleic Acids Res. 2007. PMID: 17881377 Free PMC article.

5

Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex.

Hamady M, Walker JJ, Harris JK, Gold NJ, Knight R. Hamady M, et al. Nat Methods. 2008 Mar;5(3):235-7. doi: 10.1038/nmeth.1184. Epub 2008 Feb 10. Nat Methods. 2008. PMID: 18264105 Free PMC article.

6

Characterization of airborne microbial communities at a high-elevation site and their potential to act as atmospheric ice nuclei.

Bowers RM, Lauber CL, Wiedinmyer C, Hamady M, Hallar AG, Fall R, Knight R, Fierer N. Bowers RM, et al. Among authors: hamady m. Appl Environ Microbiol. 2009 Aug;75(15):5121-30. doi: 10.1128/AEM.00447-09. Epub 2009 Jun 5. Appl Environ Microbiol. 2009. PMID: 19502432 Free PMC article.

7

Bacterial community variation in human body habitats across space and time.

Costello EK, Lauber CL, Hamady M, Fierer N, Gordon JI, Knight R. Costello EK, et al. Among authors: hamady m. Science. 2009 Dec 18;326(5960):1694-7. doi: 10.1126/science.1177486. Epub 2009 Nov 5. Science. 2009. PMID: 19892944 Free PMC article.

8

Global patterns in the biogeography of bacterial taxa.

Nemergut DR, Costello EK, Hamady M, Lozupone C, Jiang L, Schmidt SK, Fierer N, Townsend AR, Cleveland CC, Stanish L, Knight R. Nemergut DR, et al. Among authors: hamady m. Environ Microbiol. 2011 Jan;13(1):135-144. doi: 10.1111/j.1462-2920.2010.02315.x. Environ Microbiol. 2011. PMID: 21199253 Free PMC article.

9

Key challenges in proteomics and proteoinformatics. Progress in proteins.

Hamady M, Cheung TH, Resing K, Cios KJ, Knight R. Hamady M, et al. IEEE Eng Med Biol Mag. 2005 May-Jun;24(3):34-40. doi: 10.1109/memb.2005.1436456. IEEE Eng Med Biol Mag. 2005. PMID: 15971839 Review. No abstract available.

10

Does protein structure influence trypsin miscleavage? Using structural properties to predict the behavior of related proteins.

Hamady M, Cheung TH, Tufo H, Knight R. Hamady M, et al. IEEE Eng Med Biol Mag. 2005 May-Jun;24(3):58-66. doi: 10.1109/memb.2005.1436461. IEEE Eng Med Biol Mag. 2005. PMID: 15971842 No abstract available.

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