Simon R - Search Results

1

Analysis of gene expression data using BRB-ArrayTools.

Simon R, Lam A, Li MC, Ngan M, Menenzes S, Zhao Y. Simon R, et al. Cancer Inform. 2007 Feb 4;3:11-7. Cancer Inform. 2007. PMID: 19455231 Free PMC article.

2

BRB-ArrayTools Data Archive for human cancer gene expression: a unique and efficient data sharing resource.

Zhao Y, Simon R. Zhao Y, et al. Among authors: simon r. Cancer Inform. 2008;6:9-15. doi: 10.4137/cin.s448. Epub 2008 Apr 21. Cancer Inform. 2008. PMID: 19259398 Free PMC article.

3

Development and validation of predictive indices for a continuous outcome using gene expression profiles.

Zhao Y, Simon R. Zhao Y, et al. Among authors: simon r. Cancer Inform. 2010 May 7;9:105-14. doi: 10.4137/cin.s3805. Cancer Inform. 2010. PMID: 20523915 Free PMC article.

4

Gene Set Expression Comparison kit for BRB-ArrayTools.

Xu X, Zhao Y, Simon R. Xu X, et al. Among authors: simon r. Bioinformatics. 2008 Jan 1;24(1):137-9. doi: 10.1093/bioinformatics/btm541. Epub 2007 Nov 15. Bioinformatics. 2008. PMID: 18006549

5

How large a training set is needed to develop a classifier for microarray data?

Dobbin KK, Zhao Y, Simon RM. Dobbin KK, et al. Clin Cancer Res. 2008 Jan 1;14(1):108-14. doi: 10.1158/1078-0432.CCR-07-0443. Clin Cancer Res. 2008. PMID: 18172259

6

GeneMed: An Informatics Hub for the Coordination of Next-Generation Sequencing Studies that Support Precision Oncology Clinical Trials.

Zhao Y, Polley EC, Li MC, Lih CJ, Palmisano A, Sims DJ, Rubinstein LV, Conley BA, Chen AP, Williams PM, Kummar S, Doroshow JH, Simon RM. Zhao Y, et al. Cancer Inform. 2015 Mar 19;14(Suppl 2):45-55. doi: 10.4137/CIN.S17282. eCollection 2015. Cancer Inform. 2015. PMID: 25861217 Free PMC article. Review.

7

D3Oncoprint: Stand-Alone Software to Visualize and Dynamically Explore Annotated Genomic Mutation Files.

Palmisano A, Zhao Y, Simon RM. Palmisano A, et al. JCO Clin Cancer Inform. 2018 Dec;2:1-9. doi: 10.1200/CCI.17.00050. JCO Clin Cancer Inform. 2018. PMID: 30652557 Free PMC article.

8

Gene expression deconvolution in clinical samples.

Zhao Y, Simon R. Zhao Y, et al. Among authors: simon r. Genome Med. 2010 Dec 29;2(12):93. doi: 10.1186/gm214. Genome Med. 2010. PMID: 21211069 Free PMC article.

9

An adaptive method for cDNA microarray normalization.

Zhao Y, Li MC, Simon R. Zhao Y, et al. Among authors: simon r. BMC Bioinformatics. 2005 Feb 11;6:28. doi: 10.1186/1471-2105-6-28. BMC Bioinformatics. 2005. PMID: 15707486 Free PMC article.

10

Using cross-validation to evaluate predictive accuracy of survival risk classifiers based on high-dimensional data.

Simon RM, Subramanian J, Li MC, Menezes S. Simon RM, et al. Brief Bioinform. 2011 May;12(3):203-14. doi: 10.1093/bib/bbr001. Epub 2011 Feb 15. Brief Bioinform. 2011. PMID: 21324971 Free PMC article.

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