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Page 1
Exploitation of binding energy for catalysis and design.
Thyme SB, Jarjour J, Takeuchi R, Havranek JJ, Ashworth J, Scharenberg AM, Stoddard BL, Baker D. Thyme SB, et al. Among authors: havranek jj. Nature. 2009 Oct 29;461(7268):1300-4. doi: 10.1038/nature08508. Nature. 2009. PMID: 19865174 Free PMC article.
Protein-DNA binding specificity predictions with structural models.
Morozov AV, Havranek JJ, Baker D, Siggia ED. Morozov AV, et al. Among authors: havranek jj. Nucleic Acids Res. 2005 Oct 24;33(18):5781-98. doi: 10.1093/nar/gki875. Print 2005. Nucleic Acids Res. 2005. PMID: 16246914 Free PMC article.
Comparative analysis of mutant tyrosine kinase chemical rescue.
Muratore KE, Seeliger MA, Wang Z, Fomina D, Neiswinger J, Havranek JJ, Baker D, Kuriyan J, Cole PA. Muratore KE, et al. Among authors: havranek jj. Biochemistry. 2009 Apr 21;48(15):3378-86. doi: 10.1021/bi900057g. Biochemistry. 2009. PMID: 19260709 Free PMC article.
Rosetta in CAPRI rounds 13-19.
Fleishman SJ, Corn JE, Strauch EM, Whitehead TA, Andre I, Thompson J, Havranek JJ, Das R, Bradley P, Baker D. Fleishman SJ, et al. Among authors: havranek jj. Proteins. 2010 Nov 15;78(15):3212-8. doi: 10.1002/prot.22784. Proteins. 2010. PMID: 20597089 Free PMC article.
ROSETTA3: an object-oriented software suite for the simulation and design of macromolecules.
Leaver-Fay A, Tyka M, Lewis SM, Lange OF, Thompson J, Jacak R, Kaufman K, Renfrew PD, Smith CA, Sheffler W, Davis IW, Cooper S, Treuille A, Mandell DJ, Richter F, Ban YE, Fleishman SJ, Corn JE, Kim DE, Lyskov S, Berrondo M, Mentzer S, Popović Z, Havranek JJ, Karanicolas J, Das R, Meiler J, Kortemme T, Gray JJ, Kuhlman B, Baker D, Bradley P. Leaver-Fay A, et al. Among authors: havranek jj. Methods Enzymol. 2011;487:545-74. doi: 10.1016/B978-0-12-381270-4.00019-6. Methods Enzymol. 2011. PMID: 21187238 Free PMC article.
27 results