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Collaborative annotation of genes and proteins between UniProtKB/Swiss-Prot and dictyBase.
Gaudet P, Lane L, Fey P, Bridge A, Poux S, Auchincloss A, Axelsen K, Braconi Quintaje S, Boutet E, Brown P, Coudert E, Datta RS, de Lima WC, de Oliveira Lima T, Duvaud S, Farriol-Mathis N, Ferro Rojas S, Feuermann M, Gateau A, Hinz U, Hulo C, James J, Jimenez S, Jungo F, Keller G, Lemercier P, Lieberherr D, Moinat M, Nikolskaya A, Pedruzzi I, Rivoire C, Roechert B, Schneider M, Stanley E, Tognolli M, Sjölander K, Bougueleret L, Chisholm RL, Bairoch A. Gaudet P, et al. Among authors: bairoch a. Database (Oxford). 2009;2009:bap016. doi: 10.1093/database/bap016. Epub 2009 Oct 15. Database (Oxford). 2009. PMID: 20157489 Free PMC article.
UniProtKB/Swiss-Prot.
Boutet E, Lieberherr D, Tognolli M, Schneider M, Bairoch A. Boutet E, et al. Among authors: bairoch a. Methods Mol Biol. 2007;406:89-112. doi: 10.1007/978-1-59745-535-0_4. Methods Mol Biol. 2007. PMID: 18287689
HAMAP: a database of completely sequenced microbial proteome sets and manually curated microbial protein families in UniProtKB/Swiss-Prot.
Lima T, Auchincloss AH, Coudert E, Keller G, Michoud K, Rivoire C, Bulliard V, de Castro E, Lachaize C, Baratin D, Phan I, Bougueleret L, Bairoch A. Lima T, et al. Among authors: bairoch a. Nucleic Acids Res. 2009 Jan;37(Database issue):D471-8. doi: 10.1093/nar/gkn661. Epub 2008 Oct 11. Nucleic Acids Res. 2009. PMID: 18849571 Free PMC article.
UniProt Knowledgebase: a hub of integrated protein data.
Magrane M; UniProt Consortium. Magrane M, et al. Database (Oxford). 2011 Mar 29;2011:bar009. doi: 10.1093/database/bar009. Print 2011. Database (Oxford). 2011. PMID: 21447597 Free PMC article.
Automated annotation of microbial proteomes in SWISS-PROT.
Gattiker A, Michoud K, Rivoire C, Auchincloss AH, Coudert E, Lima T, Kersey P, Pagni M, Sigrist CJ, Lachaize C, Veuthey AL, Gasteiger E, Bairoch A. Gattiker A, et al. Among authors: bairoch a. Comput Biol Chem. 2003 Feb;27(1):49-58. doi: 10.1016/s1476-9271(02)00094-4. Comput Biol Chem. 2003. PMID: 12798039
205 results