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Collaborative annotation of genes and proteins between UniProtKB/Swiss-Prot and dictyBase.
Gaudet P, Lane L, Fey P, Bridge A, Poux S, Auchincloss A, Axelsen K, Braconi Quintaje S, Boutet E, Brown P, Coudert E, Datta RS, de Lima WC, de Oliveira Lima T, Duvaud S, Farriol-Mathis N, Ferro Rojas S, Feuermann M, Gateau A, Hinz U, Hulo C, James J, Jimenez S, Jungo F, Keller G, Lemercier P, Lieberherr D, Moinat M, Nikolskaya A, Pedruzzi I, Rivoire C, Roechert B, Schneider M, Stanley E, Tognolli M, Sjölander K, Bougueleret L, Chisholm RL, Bairoch A. Gaudet P, et al. Among authors: bridge a. Database (Oxford). 2009;2009:bap016. doi: 10.1093/database/bap016. Epub 2009 Oct 15. Database (Oxford). 2009. PMID: 20157489 Free PMC article.
The SIB Swiss Institute of Bioinformatics Semantic Web of data.
SIB Swiss Institute of Bioinformatics RDF Group Members. SIB Swiss Institute of Bioinformatics RDF Group Members. Nucleic Acids Res. 2024 Jan 5;52(D1):D44-D51. doi: 10.1093/nar/gkad902. Nucleic Acids Res. 2024. PMID: 37878411 Free PMC article.
IntAct--open source resource for molecular interaction data.
Kerrien S, Alam-Faruque Y, Aranda B, Bancarz I, Bridge A, Derow C, Dimmer E, Feuermann M, Friedrichsen A, Huntley R, Kohler C, Khadake J, Leroy C, Liban A, Lieftink C, Montecchi-Palazzi L, Orchard S, Risse J, Robbe K, Roechert B, Thorneycroft D, Zhang Y, Apweiler R, Hermjakob H. Kerrien S, et al. Among authors: bridge a. Nucleic Acids Res. 2007 Jan;35(Database issue):D561-5. doi: 10.1093/nar/gkl958. Epub 2006 Dec 1. Nucleic Acids Res. 2007. PMID: 17145710 Free PMC article.
The Universal Protein Resource (UniProt) 2009.
UniProt Consortium. UniProt Consortium. Nucleic Acids Res. 2009 Jan;37(Database issue):D169-74. doi: 10.1093/nar/gkn664. Epub 2008 Oct 4. Nucleic Acids Res. 2009. PMID: 18836194 Free PMC article.
The Universal Protein Resource (UniProt) in 2010.
UniProt Consortium. UniProt Consortium. Nucleic Acids Res. 2010 Jan;38(Database issue):D142-8. doi: 10.1093/nar/gkp846. Epub 2009 Oct 20. Nucleic Acids Res. 2010. PMID: 19843607 Free PMC article.
The IntAct molecular interaction database in 2010.
Aranda B, Achuthan P, Alam-Faruque Y, Armean I, Bridge A, Derow C, Feuermann M, Ghanbarian AT, Kerrien S, Khadake J, Kerssemakers J, Leroy C, Menden M, Michaut M, Montecchi-Palazzi L, Neuhauser SN, Orchard S, Perreau V, Roechert B, van Eijk K, Hermjakob H. Aranda B, et al. Among authors: bridge a. Nucleic Acids Res. 2010 Jan;38(Database issue):D525-31. doi: 10.1093/nar/gkp878. Epub 2009 Oct 22. Nucleic Acids Res. 2010. PMID: 19850723 Free PMC article.
The Gene Ontology in 2010: extensions and refinements.
Gene Ontology Consortium. Gene Ontology Consortium. Nucleic Acids Res. 2010 Jan;38(Database issue):D331-5. doi: 10.1093/nar/gkp1018. Epub 2009 Nov 17. Nucleic Acids Res. 2010. PMID: 19920128 Free PMC article.
UniProt Knowledgebase: a hub of integrated protein data.
Magrane M; UniProt Consortium. Magrane M, et al. Database (Oxford). 2011 Mar 29;2011:bar009. doi: 10.1093/database/bar009. Print 2011. Database (Oxford). 2011. PMID: 21447597 Free PMC article.
117 results