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Page 1
Distinct patterns of somatic alterations in a lymphoblastoid and a tumor genome derived from the same individual.
Galante PA, Parmigiani RB, Zhao Q, Caballero OL, de Souza JE, Navarro FC, Gerber AL, Nicolás MF, Salim AC, Silva AP, Edsall L, Devalle S, Almeida LG, Ye Z, Kuan S, Pinheiro DG, Tojal I, Pedigoni RG, de Sousa RG, Oliveira TY, de Paula MG, Ohno-Machado L, Kirkness EF, Levy S, da Silva WA Jr, Vasconcelos AT, Ren B, Zago MA, Strausberg RL, Simpson AJ, de Souza SJ, Camargo AA. Galante PA, et al. Among authors: simpson aj. Nucleic Acids Res. 2011 Aug;39(14):6056-68. doi: 10.1093/nar/gkr221. Epub 2011 Apr 14. Nucleic Acids Res. 2011. PMID: 21493686 Free PMC article.
Systematic detection of putative tumor suppressor genes through the combined use of exome and transcriptome sequencing.
Zhao Q, Kirkness EF, Caballero OL, Galante PA, Parmigiani RB, Edsall L, Kuan S, Ye Z, Levy S, Vasconcelos AT, Ren B, de Souza SJ, Camargo AA, Simpson AJ, Strausberg RL. Zhao Q, et al. Among authors: simpson aj. Genome Biol. 2010;11(11):R114. doi: 10.1186/gb-2010-11-11-r114. Epub 2010 Nov 25. Genome Biol. 2010. PMID: 21108794 Free PMC article.
Vaccines and early breast cancer.
Caballero OL, Simpson AJ, Neville AM. Caballero OL, et al. Among authors: simpson aj. Cell Cycle. 2014;13(9):1359. doi: 10.4161/cc.28747. Epub 2014 Apr 3. Cell Cycle. 2014. PMID: 24699824 Free PMC article. No abstract available.
Mutational analysis of genes coding for cell surface proteins in colorectal cancer cell lines reveal novel altered pathways, druggable mutations and mutated epitopes for targeted therapy.
Donnard E, Asprino PF, Correa BR, Bettoni F, Koyama FC, Navarro FC, Perez RO, Mariadason J, Sieber OM, Strausberg RL, Simpson AJ, Jardim DL, Reis LF, Parmigiani RB, Galante PA, Camargo AA. Donnard E, et al. Among authors: simpson aj. Oncotarget. 2014 Oct 15;5(19):9199-213. doi: 10.18632/oncotarget.2374. Oncotarget. 2014. PMID: 25193853 Free PMC article.
Collaborative research networks work.
Camargo AA, Simpson AJ. Camargo AA, et al. Among authors: simpson aj. J Clin Invest. 2003 Aug;112(4):468-71. doi: 10.1172/JCI19520. J Clin Invest. 2003. PMID: 12925684 Free PMC article.
ORESTES are enriched in rare exon usage variants affecting the encoded proteins.
Sakabe NJ, de Souza JE, Galante PA, de Oliveira PS, Passetti F, Brentani H, Osório EC, Zaiats AC, Leerkes MR, Kitajima JP, Brentani RR, Strausberg RL, Simpson AJ, de Souza SJ. Sakabe NJ, et al. Among authors: simpson aj. C R Biol. 2003 Oct-Nov;326(10-11):979-85. doi: 10.1016/j.crvi.2003.09.027. C R Biol. 2003. PMID: 14744104 Free article.
Identification and complete sequencing of novel human transcripts through the use of mouse orthologs and testis cDNA sequences.
Ferreira EN, Pires LC, Parmigiani RB, Bettoni F, Puga RD, Pinheiro DG, Andrade LE, Cruz LO, Degaki TL, Faria M Jr, Festa F, Giannella-Neto D, Giorgi RR, Goldman GH, Granja F, Gruber A, Hackel C, Henrique-Silva F, Malnic B, Manzini CV, Marie SK, Martinez-Rossi NM, Oba-Shinjo SM, Pardini MI, Rahal P, Rainho CA, Rogatto SR, Romano CM, Rodrigues V, Sales MM, Savoldi M, da Silva ID, da Silva NP, de Souza SJ, Tajara EH, Silva WA Jr, Simpson AJ, Sogayar MC, Camargo AA, Carraro DM. Ferreira EN, et al. Among authors: simpson aj. Genet Mol Res. 2004 Dec 30;3(4):493-511. Genet Mol Res. 2004. PMID: 15688316 Free article.
786 results