Dekker NH - Search Results

1

Freely orbiting magnetic tweezers to directly monitor changes in the twist of nucleic acids.

Lipfert J, Wiggin M, Kerssemakers JW, Pedaci F, Dekker NH. Lipfert J, et al. Among authors: dekker nh. Nat Commun. 2011 Aug 23;2:439. doi: 10.1038/ncomms1450. Nat Commun. 2011. PMID: 21863006 Free PMC article.

2

Friction and torque govern the relaxation of DNA supercoils by eukaryotic topoisomerase IB.

Koster DA, Croquette V, Dekker C, Shuman S, Dekker NH. Koster DA, et al. Among authors: dekker c, dekker nh. Nature. 2005 Mar 31;434(7033):671-4. doi: 10.1038/nature03395. Nature. 2005. PMID: 15800630

3

Mesoscale conformational changes in the DNA-repair complex Rad50/Mre11/Nbs1 upon binding DNA.

Moreno-Herrero F, de Jager M, Dekker NH, Kanaar R, Wyman C, Dekker C. Moreno-Herrero F, et al. Among authors: dekker c, dekker nh. Nature. 2005 Sep 15;437(7057):440-3. doi: 10.1038/nature03927. Nature. 2005. PMID: 16163361

4

Role of tension and twist in single-molecule DNA condensation.

Besteman K, Hage S, Dekker NH, Lemay SG. Besteman K, et al. Among authors: dekker nh. Phys Rev Lett. 2007 Feb 2;98(5):058103. doi: 10.1103/PhysRevLett.98.058103. Epub 2007 Jan 30. Phys Rev Lett. 2007. PMID: 17358905

5

Antitumour drugs impede DNA uncoiling by topoisomerase I.

Koster DA, Palle K, Bot ES, Bjornsti MA, Dekker NH. Koster DA, et al. Among authors: dekker nh. Nature. 2007 Jul 12;448(7150):213-7. doi: 10.1038/nature05938. Epub 2007 Jun 24. Nature. 2007. PMID: 17589503

6

Quantitative modeling and optimization of magnetic tweezers.

Lipfert J, Hao X, Dekker NH. Lipfert J, et al. Among authors: dekker nh. Biophys J. 2009 Jun 17;96(12):5040-9. doi: 10.1016/j.bpj.2009.03.055. Biophys J. 2009. PMID: 19527664 Free PMC article.

7

Single-molecule magnetic tweezers studies of type IB topoisomerases.

Lipfert J, Koster DA, Vilfan ID, Hage S, Dekker NH. Lipfert J, et al. Among authors: dekker nh. Methods Mol Biol. 2009;582:71-89. doi: 10.1007/978-1-60761-340-4_7. Methods Mol Biol. 2009. PMID: 19763943

8

Torsional sensing of small-molecule binding using magnetic tweezers.

Lipfert J, Klijnhout S, Dekker NH. Lipfert J, et al. Among authors: dekker nh. Nucleic Acids Res. 2010 Nov;38(20):7122-32. doi: 10.1093/nar/gkq598. Epub 2010 Jul 12. Nucleic Acids Res. 2010. PMID: 20624816 Free PMC article.

9

Quantitative guidelines for force calibration through spectral analysis of magnetic tweezers data.

te Velthuis AJ, Kerssemakers JW, Lipfert J, Dekker NH. te Velthuis AJ, et al. Among authors: dekker nh. Biophys J. 2010 Aug 9;99(4):1292-302. doi: 10.1016/j.bpj.2010.06.008. Biophys J. 2010. PMID: 20713015 Free PMC article.

10

Magnetic torque tweezers: measuring torsional stiffness in DNA and RecA-DNA filaments.

Lipfert J, Kerssemakers JW, Jager T, Dekker NH. Lipfert J, et al. Among authors: dekker nh. Nat Methods. 2010 Dec;7(12):977-80. doi: 10.1038/nmeth.1520. Epub 2010 Oct 17. Nat Methods. 2010. PMID: 20953173

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