Krishna S - Search Results

1

Coexistence of phage and bacteria on the boundary of self-organized refuges.

Heilmann S, Sneppen K, Krishna S. Heilmann S, et al. Among authors: krishna s. Proc Natl Acad Sci U S A. 2012 Jul 31;109(31):12828-33. doi: 10.1073/pnas.1200771109. Epub 2012 Jul 17. Proc Natl Acad Sci U S A. 2012. PMID: 22807479 Free PMC article.

2

Minimal model of spiky oscillations in NF-kappaB signaling.

Krishna S, Jensen MH, Sneppen K. Krishna S, et al. Proc Natl Acad Sci U S A. 2006 Jul 18;103(29):10840-5. doi: 10.1073/pnas.0604085103. Epub 2006 Jul 7. Proc Natl Acad Sci U S A. 2006. PMID: 16829571 Free PMC article.

3

Combinatorics of feedback in cellular uptake and metabolism of small molecules.

Krishna S, Semsey S, Sneppen K. Krishna S, et al. Proc Natl Acad Sci U S A. 2007 Dec 26;104(52):20815-9. doi: 10.1073/pnas.0706231105. Epub 2007 Dec 19. Proc Natl Acad Sci U S A. 2007. PMID: 18093927 Free PMC article.

4

Sustainability of virulence in a phage-bacterial ecosystem.

Heilmann S, Sneppen K, Krishna S. Heilmann S, et al. Among authors: krishna s. J Virol. 2010 Mar;84(6):3016-22. doi: 10.1128/JVI.02326-09. Epub 2010 Jan 13. J Virol. 2010. PMID: 20071588 Free PMC article.

5

Minimal gene regulatory circuits that can count like bacteriophage lambda.

Avlund M, Dodd IB, Sneppen K, Krishna S. Avlund M, et al. Among authors: krishna s. J Mol Biol. 2009 Dec 11;394(4):681-93. doi: 10.1016/j.jmb.2009.09.053. Epub 2009 Sep 28. J Mol Biol. 2009. PMID: 19796646

6

Network models of phage-bacteria coevolution.

Rosvall M, Dodd IB, Krishna S, Sneppen K. Rosvall M, et al. Among authors: krishna s. Phys Rev E Stat Nonlin Soft Matter Phys. 2006 Dec;74(6 Pt 2):066105. doi: 10.1103/PhysRevE.74.066105. Epub 2006 Dec 8. Phys Rev E Stat Nonlin Soft Matter Phys. 2006. PMID: 17280119

7

UV-induced mutagenesis in Escherichia coli SOS response: a quantitative model.

Krishna S, Maslov S, Sneppen K. Krishna S, et al. PLoS Comput Biol. 2007 Mar 16;3(3):e41. doi: 10.1371/journal.pcbi.0030041. Epub 2007 Jan 16. PLoS Comput Biol. 2007. PMID: 17367202 Free PMC article.

8

Toolbox model of evolution of prokaryotic metabolic networks and their regulation.

Maslov S, Krishna S, Pang TY, Sneppen K. Maslov S, et al. Among authors: krishna s. Proc Natl Acad Sci U S A. 2009 Jun 16;106(24):9743-8. doi: 10.1073/pnas.0903206106. Epub 2009 May 29. Proc Natl Acad Sci U S A. 2009. PMID: 19482938 Free PMC article.

9

Dynamic features of gene expression control by small regulatory RNAs.

Mitarai N, Benjamin JA, Krishna S, Semsey S, Csiszovszki Z, Massé E, Sneppen K. Mitarai N, et al. Among authors: krishna s. Proc Natl Acad Sci U S A. 2009 Jun 30;106(26):10655-9. doi: 10.1073/pnas.0901466106. Epub 2009 Jun 16. Proc Natl Acad Sci U S A. 2009. PMID: 19541626 Free PMC article.

10

Why do phage play dice?

Avlund M, Dodd IB, Semsey S, Sneppen K, Krishna S. Avlund M, et al. Among authors: krishna s. J Virol. 2009 Nov;83(22):11416-20. doi: 10.1128/JVI.01057-09. Epub 2009 Sep 9. J Virol. 2009. PMID: 19740995 Free PMC article.

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