Boer JM - Search Results

1

Integrated analysis of microRNA and mRNA expression: adding biological significance to microRNA target predictions.

van Iterson M, Bervoets S, de Meijer EJ, Buermans HP, 't Hoen PA, Menezes RX, Boer JM. van Iterson M, et al. Among authors: boer jm. Nucleic Acids Res. 2013 Aug;41(15):e146. doi: 10.1093/nar/gkt525. Epub 2013 Jun 14. Nucleic Acids Res. 2013. PMID: 23771142 Free PMC article.

2

Expression profiling in stably regenerating skeletal muscle of dystrophin-deficient mdx mice.

Boer JM, de Meijer EJ, Mank EM, van Ommen GB, den Dunnen JT. Boer JM, et al. Neuromuscul Disord. 2002 Oct;12 Suppl 1:S118-24. doi: 10.1016/s0960-8966(02)00092-5. Neuromuscul Disord. 2002. PMID: 12206806

3

Intensity-based analysis of two-colour microarrays enables efficient and flexible hybridization designs.

't Hoen PA, Turk R, Boer JM, Sterrenburg E, de Menezes RX, van Ommen GJ, den Dunnen JT. 't Hoen PA, et al. Among authors: boer jm. Nucleic Acids Res. 2004 Feb 24;32(4):e41. doi: 10.1093/nar/gnh038. Nucleic Acids Res. 2004. PMID: 14982960 Free PMC article.

4

Gene expression variation between mouse inbred strains.

Turk R, 't Hoen PA, Sterrenburg E, de Menezes RX, de Meijer EJ, Boer JM, van Ommen GJ, den Dunnen JT. Turk R, et al. Among authors: boer jm. BMC Genomics. 2004 Aug 18;5(1):57. doi: 10.1186/1471-2164-5-57. BMC Genomics. 2004. PMID: 15317656 Free PMC article.

5

Large-scale gene expression analysis of human skeletal myoblast differentiation.

Sterrenburg E, Turk R, 't Hoen PA, van Deutekom JC, Boer JM, van Ommen GJ, den Dunnen JT. Sterrenburg E, et al. Among authors: boer jm. Neuromuscul Disord. 2004 Sep;14(8-9):507-18. doi: 10.1016/j.nmd.2004.03.008. Neuromuscul Disord. 2004. PMID: 15336692

6

Generation and characterization of transgenic mice with the full-length human DMD gene.

't Hoen PA, de Meijer EJ, Boer JM, Vossen RH, Turk R, Maatman RG, Davies KE, van Ommen GJ, van Deutekom JC, den Dunnen JT. 't Hoen PA, et al. Among authors: boer jm. J Biol Chem. 2008 Feb 29;283(9):5899-907. doi: 10.1074/jbc.M709410200. Epub 2007 Dec 13. J Biol Chem. 2008. PMID: 18083704 Free article.

7

Can subtle changes in gene expression be consistently detected with different microarray platforms?

Pedotti P, 't Hoen PA, Vreugdenhil E, Schenk GJ, Vossen RH, Ariyurek Y, de Hollander M, Kuiper R, van Ommen GJ, den Dunnen JT, Boer JM, de Menezes RX. Pedotti P, et al. Among authors: boer jm. BMC Genomics. 2008 Mar 10;9:124. doi: 10.1186/1471-2164-9-124. BMC Genomics. 2008. PMID: 18331641 Free PMC article.

8

Deep sequencing-based expression analysis shows major advances in robustness, resolution and inter-lab portability over five microarray platforms.

't Hoen PA, Ariyurek Y, Thygesen HH, Vreugdenhil E, Vossen RH, de Menezes RX, Boer JM, van Ommen GJ, den Dunnen JT. 't Hoen PA, et al. Among authors: boer jm. Nucleic Acids Res. 2008 Dec;36(21):e141. doi: 10.1093/nar/gkn705. Epub 2008 Oct 15. Nucleic Acids Res. 2008. PMID: 18927111 Free PMC article.

9

Integrated analysis of DNA copy number and gene expression microarray data using gene sets.

Menezes RX, Boetzer M, Sieswerda M, van Ommen GJ, Boer JM. Menezes RX, et al. Among authors: boer jm. BMC Bioinformatics. 2009 Jun 29;10:203. doi: 10.1186/1471-2105-10-203. BMC Bioinformatics. 2009. PMID: 19563656 Free PMC article.

10

Relative power and sample size analysis on gene expression profiling data.

van Iterson M, 't Hoen PA, Pedotti P, Hooiveld GJ, den Dunnen JT, van Ommen GJ, Boer JM, Menezes RX. van Iterson M, et al. Among authors: boer jm. BMC Genomics. 2009 Sep 17;10:439. doi: 10.1186/1471-2164-10-439. BMC Genomics. 2009. PMID: 19758461 Free PMC article.

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