Deshpande NP - Search Results

1

Comparative genomics of Campylobacter concisus isolates reveals genetic diversity and provides insights into disease association.

Deshpande NP, Kaakoush NO, Wilkins MR, Mitchell HM. Deshpande NP, et al. BMC Genomics. 2013 Aug 28;14:585. doi: 10.1186/1471-2164-14-585. BMC Genomics. 2013. PMID: 23984967 Free PMC article.

2

Sequencing and validation of the genome of a Campylobacter concisus reveals intra-species diversity.

Deshpande NP, Kaakoush NO, Mitchell H, Janitz K, Raftery MJ, Li SS, Wilkins MR. Deshpande NP, et al. PLoS One. 2011;6(7):e22170. doi: 10.1371/journal.pone.0022170. Epub 2011 Jul 29. PLoS One. 2011. PMID: 21829448 Free PMC article.

3

Comparative analyses of Campylobacter concisus strains reveal the genome of the reference strain BAA-1457 is not representative of the species.

Kaakoush NO, Deshpande NP, Wilkins MR, Raftery MJ, Janitz K, Mitchell H. Kaakoush NO, et al. Among authors: deshpande np. Gut Pathog. 2011 Oct 13;3:15. doi: 10.1186/1757-4749-3-15. Gut Pathog. 2011. PMID: 21992484 Free PMC article.

4

The pathogenic potential of Campylobacter concisus strains associated with chronic intestinal diseases.

Kaakoush NO, Deshpande NP, Wilkins MR, Tan CG, Burgos-Portugal JA, Raftery MJ, Day AS, Lemberg DA, Mitchell H. Kaakoush NO, et al. Among authors: deshpande np. PLoS One. 2011;6(12):e29045. doi: 10.1371/journal.pone.0029045. Epub 2011 Dec 14. PLoS One. 2011. PMID: 22194985 Free PMC article.

5

Transcriptomic and proteomic analyses reveal key innate immune signatures in the host response to the gastrointestinal pathogen Campylobacter concisus.

Kaakoush NO, Deshpande NP, Man SM, Burgos-Portugal JA, Khattak FA, Raftery MJ, Wilkins MR, Mitchell HM. Kaakoush NO, et al. Among authors: deshpande np. Infect Immun. 2015 Feb;83(2):832-45. doi: 10.1128/IAI.03012-14. Epub 2014 Dec 8. Infect Immun. 2015. PMID: 25486993 Free PMC article.

6

The draft genome of the pest tephritid fruit fly Bactrocera tryoni: resources for the genomic analysis of hybridising species.

Gilchrist AS, Shearman DC, Frommer M, Raphael KA, Deshpande NP, Wilkins MR, Sherwin WB, Sved JA. Gilchrist AS, et al. Among authors: deshpande np. BMC Genomics. 2014 Dec 20;15(1):1153. doi: 10.1186/1471-2164-15-1153. BMC Genomics. 2014. PMID: 25527032 Free PMC article.

7

Novel genetic markers define a subgroup of pathogenic Escherichia coli strains belonging to the B2 phylogenetic group.

Deshpande NP, Wilkins MR, Mitchell HM, Kaakoush NO. Deshpande NP, et al. FEMS Microbiol Lett. 2015 Nov;362(22):fnv193. doi: 10.1093/femsle/fnv193. Epub 2015 Oct 12. FEMS Microbiol Lett. 2015. PMID: 26459886

8

Intra-species variation within Lactobacillus rhamnosus correlates to beneficial or harmful outcomes: lessons from the oral cavity.

Nadkarni MA, Deshpande NP, Wilkins MR, Hunter N. Nadkarni MA, et al. Among authors: deshpande np. BMC Genomics. 2020 Sep 24;21(1):661. doi: 10.1186/s12864-020-07062-3. BMC Genomics. 2020. PMID: 32972358 Free PMC article.

9

Genome Sequence of Campylobacter showae UNSWCD, Isolated from a Patient with Crohn's Disease.

Tay AP, Kaakoush NO, Deshpande NP, Chen Z, Mitchell H, Wilkins MR. Tay AP, et al. Among authors: deshpande np. Genome Announc. 2013 Jan;1(1):e00193-12. doi: 10.1128/genomeA.00193-12. Epub 2013 Feb 14. Genome Announc. 2013. PMID: 23409253 Free PMC article.

10

Tools to covisualize and coanalyze proteomic data with genomes and transcriptomes: validation of genes and alternative mRNA splicing.

Pang CN, Tay AP, Aya C, Twine NA, Harkness L, Hart-Smith G, Chia SZ, Chen Z, Deshpande NP, Kaakoush NO, Mitchell HM, Kassem M, Wilkins MR. Pang CN, et al. Among authors: deshpande np. J Proteome Res. 2014 Jan 3;13(1):84-98. doi: 10.1021/pr400820p. Epub 2013 Nov 12. J Proteome Res. 2014. PMID: 24152167

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