Cuppen E - Search Results

1

Targeted next-generation sequencing: a novel diagnostic tool for primary immunodeficiencies.

Nijman IJ, van Montfrans JM, Hoogstraat M, Boes ML, van de Corput L, Renner ED, van Zon P, van Lieshout S, Elferink MG, van der Burg M, Vermont CL, van der Zwaag B, Janson E, Cuppen E, Ploos van Amstel JK, van Gijn ME. Nijman IJ, et al. Among authors: cuppen e. J Allergy Clin Immunol. 2014 Feb;133(2):529-34. doi: 10.1016/j.jaci.2013.08.032. Epub 2013 Oct 15. J Allergy Clin Immunol. 2014. PMID: 24139496

2

Efficient target-selected mutagenesis in Caenorhabditis elegans: toward a knockout for every gene.

Cuppen E, Gort E, Hazendonk E, Mudde J, van de Belt J, Nijman IJ, Guryev V, Plasterk RH. Cuppen E, et al. Genome Res. 2007 May;17(5):649-58. doi: 10.1101/gr.6080607. Epub 2007 Apr 6. Genome Res. 2007. PMID: 17416746 Free PMC article.

3

Genome-wide pattern of TCF7L2/TCF4 chromatin occupancy in colorectal cancer cells.

Hatzis P, van der Flier LG, van Driel MA, Guryev V, Nielsen F, Denissov S, Nijman IJ, Koster J, Santo EE, Welboren W, Versteeg R, Cuppen E, van de Wetering M, Clevers H, Stunnenberg HG. Hatzis P, et al. Among authors: cuppen e. Mol Cell Biol. 2008 Apr;28(8):2732-44. doi: 10.1128/MCB.02175-07. Epub 2008 Feb 11. Mol Cell Biol. 2008. PMID: 18268006 Free PMC article.

4

A genome-wide SNP panel for mapping and association studies in the rat.

Nijman IJ, Kuipers S, Verheul M, Guryev V, Cuppen E. Nijman IJ, et al. Among authors: cuppen e. BMC Genomics. 2008 Feb 25;9:95. doi: 10.1186/1471-2164-9-95. BMC Genomics. 2008. PMID: 18298839 Free PMC article.

5

Mismatch repair deficiency does not enhance ENU mutagenesis in the zebrafish germ line.

Feitsma H, de Bruijn E, van de Belt J, Nijman IJ, Cuppen E. Feitsma H, et al. Among authors: cuppen e. Mutagenesis. 2008 Jul;23(4):325-9. doi: 10.1093/mutage/gen019. Epub 2008 May 9. Mutagenesis. 2008. PMID: 18469325

6

Zebrafish with mutations in mismatch repair genes develop neurofibromas and other tumors.

Feitsma H, Kuiper RV, Korving J, Nijman IJ, Cuppen E. Feitsma H, et al. Among authors: cuppen e. Cancer Res. 2008 Jul 1;68(13):5059-66. doi: 10.1158/0008-5472.CAN-08-0019. Cancer Res. 2008. PMID: 18593904

7

Improved generation of rat gene knockouts by target-selected mutagenesis in mismatch repair-deficient animals.

van Boxtel R, Toonen PW, Verheul M, van Roekel HS, Nijman IJ, Guryev V, Cuppen E. van Boxtel R, et al. Among authors: cuppen e. BMC Genomics. 2008 Oct 7;9:460. doi: 10.1186/1471-2164-9-460. BMC Genomics. 2008. PMID: 18840264 Free PMC article.

8

Next-generation sequencing approaches in genetic rodent model systems to study functional effects of human genetic variation.

Guryev V, Cuppen E. Guryev V, et al. Among authors: cuppen e. FEBS Lett. 2009 Jun 5;583(11):1668-73. doi: 10.1016/j.febslet.2009.04.020. Epub 2009 Apr 18. FEBS Lett. 2009. PMID: 19379744 Free article. Review.

9

Genes unlinked to the leptin receptor influence urinary albumin excretion in obese Zucker rats.

Kim K, Warden CH, Griffey SM, Vilches-Moure JG, Hansen S, Cuppen E, Nijman IJ, Chiu S, Stern JS. Kim K, et al. Among authors: cuppen e. Physiol Genomics. 2010 May;41(3):297-305. doi: 10.1152/physiolgenomics.90367.2008. Epub 2010 Feb 16. Physiol Genomics. 2010. PMID: 20159938 Free PMC article.

10

Accurate SNP and mutation detection by targeted custom microarray-based genomic enrichment of short-fragment sequencing libraries.

Mokry M, Feitsma H, Nijman IJ, de Bruijn E, van der Zaag PJ, Guryev V, Cuppen E. Mokry M, et al. Among authors: cuppen e. Nucleic Acids Res. 2010 Jun;38(10):e116. doi: 10.1093/nar/gkq072. Epub 2010 Feb 17. Nucleic Acids Res. 2010. PMID: 20164091 Free PMC article.

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