Lipfert J - Search Results

1

Double-stranded RNA under force and torque: similarities to and striking differences from double-stranded DNA.

Lipfert J, Skinner GM, Keegstra JM, Hensgens T, Jager T, Dulin D, Köber M, Yu Z, Donkers SP, Chou FC, Das R, Dekker NH. Lipfert J, et al. Proc Natl Acad Sci U S A. 2014 Oct 28;111(43):15408-13. doi: 10.1073/pnas.1407197111. Epub 2014 Oct 13. Proc Natl Acad Sci U S A. 2014. PMID: 25313077 Free PMC article.

2

Thermally Switchable Nanogate Based on Polymer Phase Transition.

Kolbeck PJ, Benaoudia D, Chazot-Franguiadakis L, Delecourt G, Mathé J, Li S, Bonnet R, Martin P, Lipfert J, Salvetti A, Boukhet M, Bennevault V, Lacroix JC, Guégan P, Montel F. Kolbeck PJ, et al. Among authors: lipfert j. Nano Lett. 2023 Jun 14;23(11):4862-4869. doi: 10.1021/acs.nanolett.3c00438. Epub 2023 May 22. Nano Lett. 2023. PMID: 37212527

3

Structural transitions and thermodynamics of a glycine-dependent riboswitch from Vibrio cholerae.

Lipfert J, Das R, Chu VB, Kudaravalli M, Boyd N, Herschlag D, Doniach S. Lipfert J, et al. J Mol Biol. 2007 Feb 2;365(5):1393-406. doi: 10.1016/j.jmb.2006.10.022. Epub 2006 Oct 13. J Mol Biol. 2007. PMID: 17118400 Free PMC article.

4

Quantitative modeling and optimization of magnetic tweezers.

Lipfert J, Hao X, Dekker NH. Lipfert J, et al. Biophys J. 2009 Jun 17;96(12):5040-9. doi: 10.1016/j.bpj.2009.03.055. Biophys J. 2009. PMID: 19527664 Free PMC article.

5

Single-molecule magnetic tweezers studies of type IB topoisomerases.

Lipfert J, Koster DA, Vilfan ID, Hage S, Dekker NH. Lipfert J, et al. Methods Mol Biol. 2009;582:71-89. doi: 10.1007/978-1-60761-340-4_7. Methods Mol Biol. 2009. PMID: 19763943

6

Torsional sensing of small-molecule binding using magnetic tweezers.

Lipfert J, Klijnhout S, Dekker NH. Lipfert J, et al. Nucleic Acids Res. 2010 Nov;38(20):7122-32. doi: 10.1093/nar/gkq598. Epub 2010 Jul 12. Nucleic Acids Res. 2010. PMID: 20624816 Free PMC article.

7

Quantitative guidelines for force calibration through spectral analysis of magnetic tweezers data.

te Velthuis AJ, Kerssemakers JW, Lipfert J, Dekker NH. te Velthuis AJ, et al. Among authors: lipfert j. Biophys J. 2010 Aug 9;99(4):1292-302. doi: 10.1016/j.bpj.2010.06.008. Biophys J. 2010. PMID: 20713015 Free PMC article.

8

Magnetic torque tweezers: measuring torsional stiffness in DNA and RecA-DNA filaments.

Lipfert J, Kerssemakers JW, Jager T, Dekker NH. Lipfert J, et al. Nat Methods. 2010 Dec;7(12):977-80. doi: 10.1038/nmeth.1520. Epub 2010 Oct 17. Nat Methods. 2010. PMID: 20953173

9

Freely orbiting magnetic tweezers to directly monitor changes in the twist of nucleic acids.

Lipfert J, Wiggin M, Kerssemakers JW, Pedaci F, Dekker NH. Lipfert J, et al. Nat Commun. 2011 Aug 23;2:439. doi: 10.1038/ncomms1450. Nat Commun. 2011. PMID: 21863006 Free PMC article.

10

A method to track rotational motion for use in single-molecule biophysics.

Lipfert J, Kerssemakers JJ, Rojer M, Dekker NH. Lipfert J, et al. Rev Sci Instrum. 2011 Oct;82(10):103707. doi: 10.1063/1.3650461. Rev Sci Instrum. 2011. PMID: 22047303

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