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The Sol Genomics Network (SGN)--from genotype to phenotype to breeding.
Fernandez-Pozo N, Menda N, Edwards JD, Saha S, Tecle IY, Strickler SR, Bombarely A, Fisher-York T, Pujar A, Foerster H, Yan A, Mueller LA. Fernandez-Pozo N, et al. Among authors: saha s. Nucleic Acids Res. 2015 Jan;43(Database issue):D1036-41. doi: 10.1093/nar/gku1195. Epub 2014 Nov 26. Nucleic Acids Res. 2015. PMID: 25428362 Free PMC article.
Combining 'omics and microscopy to visualize interactions between the Asian citrus psyllid vector and the Huanglongbing pathogen Candidatus Liberibacter asiaticus in the insect gut.
Kruse A, Fattah-Hosseini S, Saha S, Johnson R, Warwick E, Sturgeon K, Mueller L, MacCoss MJ, Shatters RG Jr, Cilia Heck M. Kruse A, et al. Among authors: saha s. PLoS One. 2017 Jun 20;12(6):e0179531. doi: 10.1371/journal.pone.0179531. eCollection 2017. PLoS One. 2017. PMID: 28632769 Free PMC article.
Improved annotation of the insect vector of citrus greening disease: biocuration by a diverse genomics community.
Saha S, Hosmani PS, Villalobos-Ayala K, Miller S, Shippy T, Flores M, Rosendale A, Cordola C, Bell T, Mann H, DeAvila G, DeAvila D, Moore Z, Buller K, Ciolkevich K, Nandyal S, Mahoney R, Van Voorhis J, Dunlevy M, Farrow D, Hunter D, Morgan T, Shore K, Guzman V, Izsak A, Dixon DE, Cridge A, Cano L, Cao X, Jiang H, Leng N, Johnson S, Cantarel BL, Richards S, English A, Shatters RG, Childers C, Chen MJ, Hunter W, Cilia M, Mueller LA, Munoz-Torres M, Nelson D, Poelchau MF, Benoit JB, Wiersma-Koch H, D'Elia T, Brown SJ. Saha S, et al. Database (Oxford). 2017 Jan 1;2017:bax032. doi: 10.1093/database/bax032. Database (Oxford). 2017. PMID: 29220441 Free PMC article.
The Ptr1 Locus of Solanum lycopersicoides Confers Resistance to Race 1 Strains of Pseudomonas syringae pv. tomato and to Ralstonia pseudosolanacearum by Recognizing the Type III Effectors AvrRpt2 and RipBN.
Mazo-Molina C, Mainiero S, Hind SR, Kraus CM, Vachev M, Maviane-Macia F, Lindeberg M, Saha S, Strickler SR, Feder A, Giovannoni JJ, Smart CD, Peeters N, Martin GB. Mazo-Molina C, et al. Among authors: saha s. Mol Plant Microbe Interact. 2019 Aug;32(8):949-960. doi: 10.1094/MPMI-01-19-0018-R. Epub 2019 Jun 12. Mol Plant Microbe Interact. 2019. PMID: 30785360
Improved annotation of the insect vector of citrus greening disease: biocuration by a diverse genomics community.
Saha S, Hosmani PS, Villalobos-Ayala K, Miller S, Shippy T, Flores M, Rosendale A, Cordola C, Bell T, Mann H, DeAvila G, DeAvila D, Moore Z, Buller K, Ciolkevich K, Nandyal S, Mahoney R, Voorhis JV, Dunlevy M, Farrow D, Hunter D, Morgan T, Shore K, Guzman V, Izsak A, Dixon DE, Cridge A, Cano L, Cao X, Jiang H, Leng N, Johnson S, Cantarel BL, Richards S, English A, Shatters RG, Childers C, Chen MJ, Hunter W, Cilia M, Mueller LA, Munoz-Torres M, Nelson D, Poelchau MF, Benoit JB, Wiersma-Koch H, D'Elia T, Brown SJ. Saha S, et al. Database (Oxford). 2019 Jan 1;2019:baz035. doi: 10.1093/database/baz035. Database (Oxford). 2019. PMID: 30820572 Free PMC article. No abstract available.
A quick guide for student-driven community genome annotation.
Hosmani PS, Shippy T, Miller S, Benoit JB, Munoz-Torres M, Flores-Gonzalez M, Mueller LA, Wiersma-Koch H, D'Elia T, Brown SJ, Saha S. Hosmani PS, et al. Among authors: saha s. PLoS Comput Biol. 2019 Apr 3;15(4):e1006682. doi: 10.1371/journal.pcbi.1006682. eCollection 2019 Apr. PLoS Comput Biol. 2019. PMID: 30943207 Free PMC article.
Longitudinal Transcriptomic, Proteomic, and Metabolomic Analyses of Citrus sinensis (L.) Osbeck Graft-Inoculated with "Candidatus Liberibacter asiaticus".
Chin EL, Ramsey JS, Mishchuk DO, Saha S, Foster E, Chavez JD, Howe K, Zhong X, Polek M, Godfrey KE, Mueller LA, Bruce JE, Heck M, Slupsky CM. Chin EL, et al. Among authors: saha s. J Proteome Res. 2020 Feb 7;19(2):719-732. doi: 10.1021/acs.jproteome.9b00616. Epub 2020 Jan 15. J Proteome Res. 2020. PMID: 31885275
5,898 results