Kohlbacher O - Search Results

1

Workflows for automated downstream data analysis and visualization in large-scale computational mass spectrometry.

Aiche S, Sachsenberg T, Kenar E, Walzer M, Wiswedel B, Kristl T, Boyles M, Duschl A, Huber CG, Berthold MR, Reinert K, Kohlbacher O. Aiche S, et al. Among authors: kohlbacher o. Proteomics. 2015 Apr;15(8):1443-7. doi: 10.1002/pmic.201400391. Epub 2015 Feb 14. Proteomics. 2015. PMID: 25604327 Free PMC article.

2

Absolute myoglobin quantitation in serum by combining two-dimensional liquid chromatography-electrospray ionization mass spectrometry and novel data analysis algorithms.

Mayr BM, Kohlbacher O, Reinert K, Sturm M, Gröpl C, Lange E, Klein C, Huber CG. Mayr BM, et al. Among authors: kohlbacher o. J Proteome Res. 2006 Feb;5(2):414-21. doi: 10.1021/pr050344u. J Proteome Res. 2006. PMID: 16457608

3

Structure-activity relationships in chromatography: retention prediction of oligonucleotides with support vector regression.

Kohlbacher O, Quinten S, Sturm M, Mayr BM, Huber CG. Kohlbacher O, et al. Angew Chem Int Ed Engl. 2006 Oct 27;45(42):7009-12. doi: 10.1002/anie.200602561. Angew Chem Int Ed Engl. 2006. PMID: 17009385 No abstract available.

4

High-accuracy peak picking of proteomics data using wavelet techniques.

Lange E, Gröpl C, Reinert K, Kohlbacher O, Hildebrandt A. Lange E, et al. Among authors: kohlbacher o. Pac Symp Biocomput. 2006:243-54. Pac Symp Biocomput. 2006. PMID: 17094243 Free article.

5

TOPP--the OpenMS proteomics pipeline.

Kohlbacher O, Reinert K, Gröpl C, Lange E, Pfeifer N, Schulz-Trieglaff O, Sturm M. Kohlbacher O, et al. Bioinformatics. 2007 Jan 15;23(2):e191-7. doi: 10.1093/bioinformatics/btl299. Bioinformatics. 2007. PMID: 17237091

6

A statistical learning approach to the modeling of chromatographic retention of oligonucleotides incorporating sequence and secondary structure data.

Sturm M, Quinten S, Huber CG, Kohlbacher O. Sturm M, et al. Among authors: kohlbacher o. Nucleic Acids Res. 2007;35(12):4195-202. doi: 10.1093/nar/gkm338. Epub 2007 Jun 13. Nucleic Acids Res. 2007. PMID: 17567619 Free PMC article.

7

Statistical learning of peptide retention behavior in chromatographic separations: a new kernel-based approach for computational proteomics.

Pfeifer N, Leinenbach A, Huber CG, Kohlbacher O. Pfeifer N, et al. Among authors: kohlbacher o. BMC Bioinformatics. 2007 Nov 30;8:468. doi: 10.1186/1471-2105-8-468. BMC Bioinformatics. 2007. PMID: 18053132 Free PMC article.

8

OpenMS - an open-source software framework for mass spectrometry.

Sturm M, Bertsch A, Gröpl C, Hildebrandt A, Hussong R, Lange E, Pfeifer N, Schulz-Trieglaff O, Zerck A, Reinert K, Kohlbacher O. Sturm M, et al. Among authors: kohlbacher o. BMC Bioinformatics. 2008 Mar 26;9:163. doi: 10.1186/1471-2105-9-163. BMC Bioinformatics. 2008. PMID: 18366760 Free PMC article.

9

LC-MSsim--a simulation software for liquid chromatography mass spectrometry data.

Schulz-Trieglaff O, Pfeifer N, Gröpl C, Kohlbacher O, Reinert K. Schulz-Trieglaff O, et al. Among authors: kohlbacher o. BMC Bioinformatics. 2008 Oct 8;9:423. doi: 10.1186/1471-2105-9-423. BMC Bioinformatics. 2008. PMID: 18842122 Free PMC article.

10

Improving peptide identification in proteome analysis by a two-dimensional retention time filtering approach.

Pfeifer N, Leinenbach A, Huber CG, Kohlbacher O. Pfeifer N, et al. Among authors: kohlbacher o. J Proteome Res. 2009 Aug;8(8):4109-15. doi: 10.1021/pr900064b. J Proteome Res. 2009. PMID: 19492844

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