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Unification of miRNA and isomiR research: the mirGFF3 format and the mirtop API.
Desvignes T, Loher P, Eilbeck K, Ma J, Urgese G, Fromm B, Sydes J, Aparicio-Puerta E, Barrera V, Espín R, Thibord F, Bofill-De Ros X, Londin E, Telonis AG, Ficarra E, Friedländer MR, Postlethwait JH, Rigoutsos I, Hackenberg M, Vlachos IS, Halushka MK, Pantano L. Desvignes T, et al. Among authors: pantano l. Bioinformatics. 2020 Feb 1;36(3):698-703. doi: 10.1093/bioinformatics/btz675. Bioinformatics. 2020. PMID: 31504201 Free PMC article.
A highly expressed miR-101 isomiR is a functional silencing small RNA.
Llorens F, Bañez-Coronel M, Pantano L, del Río JA, Ferrer I, Estivill X, Martí E. Llorens F, et al. Among authors: pantano l. BMC Genomics. 2013 Feb 15;14:104. doi: 10.1186/1471-2164-14-104. BMC Genomics. 2013. PMID: 23414127 Free PMC article.
Microarray and deep sequencing cross-platform analysis of the mirRNome and isomiR variation in response to epidermal growth factor.
Llorens F, Hummel M, Pantano L, Pastor X, Vivancos A, Castillo E, Mattlin H, Ferrer A, Ingham M, Noguera M, Kofler R, Dohm JC, Pluvinet R, Bayés M, Himmelbauer H, del Rio JA, Martí E, Sumoy L. Llorens F, et al. Among authors: pantano l. BMC Genomics. 2013 Jun 1;14:371. doi: 10.1186/1471-2164-14-371. BMC Genomics. 2013. PMID: 23724959 Free PMC article.
Circulating miRNAs, isomiRs and small RNA clusters in human plasma and breast milk.
Rubio M, Bustamante M, Hernandez-Ferrer C, Fernandez-Orth D, Pantano L, Sarria Y, Piqué-Borras M, Vellve K, Agramunt S, Carreras R, Estivill X, Gonzalez JR, Mayor A. Rubio M, et al. Among authors: pantano l. PLoS One. 2018 Mar 5;13(3):e0193527. doi: 10.1371/journal.pone.0193527. eCollection 2018. PLoS One. 2018. PMID: 29505615 Free PMC article.
78 results