Brown CM - Search Results

1

Interference-driven spacer acquisition is dominant over naive and primed adaptation in a native CRISPR-Cas system.

Staals RH, Jackson SA, Biswas A, Brouns SJ, Brown CM, Fineran PC. Staals RH, et al. Among authors: brown cm. Nat Commun. 2016 Oct 3;7:12853. doi: 10.1038/ncomms12853. Nat Commun. 2016. PMID: 27694798 Free PMC article.

2

CRISPRTarget: bioinformatic prediction and analysis of crRNA targets.

Biswas A, Gagnon JN, Brouns SJ, Fineran PC, Brown CM. Biswas A, et al. Among authors: brown cm. RNA Biol. 2013 May;10(5):817-27. doi: 10.4161/rna.24046. Epub 2013 Mar 14. RNA Biol. 2013. PMID: 23492433 Free PMC article.

3

Accurate computational prediction of the transcribed strand of CRISPR non-coding RNAs.

Biswas A, Fineran PC, Brown CM. Biswas A, et al. Among authors: brown cm. Bioinformatics. 2014 Jul 1;30(13):1805-13. doi: 10.1093/bioinformatics/btu114. Epub 2014 Feb 27. Bioinformatics. 2014. PMID: 24578404

4

Scan for Motifs: a webserver for the analysis of post-transcriptional regulatory elements in the 3' untranslated regions (3' UTRs) of mRNAs.

Biswas A, Brown CM. Biswas A, et al. Among authors: brown cm. BMC Bioinformatics. 2014 Jun 8;15:174. doi: 10.1186/1471-2105-15-174. BMC Bioinformatics. 2014. PMID: 24909639 Free PMC article.

5

Computational Detection of CRISPR/crRNA Targets.

Biswas A, Fineran PC, Brown CM. Biswas A, et al. Among authors: brown cm. Methods Mol Biol. 2015;1311:77-89. doi: 10.1007/978-1-4939-2687-9_5. Methods Mol Biol. 2015. PMID: 25981467

6

CRISPRDetect: A flexible algorithm to define CRISPR arrays.

Biswas A, Staals RH, Morales SE, Fineran PC, Brown CM. Biswas A, et al. Among authors: brown cm. BMC Genomics. 2016 May 17;17:356. doi: 10.1186/s12864-016-2627-0. BMC Genomics. 2016. PMID: 27184979 Free PMC article.

7

Prediction and diversity of tracrRNAs from type II CRISPR-Cas systems.

Chyou TY, Brown CM. Chyou TY, et al. Among authors: brown cm. RNA Biol. 2019 Apr;16(4):423-434. doi: 10.1080/15476286.2018.1498281. Epub 2018 Aug 2. RNA Biol. 2019. PMID: 29995560 Free PMC article.

8

Bioinformatic evidence of widespread priming in type I and II CRISPR-Cas systems.

Nicholson TJ, Jackson SA, Croft BI, Staals RHJ, Fineran PC, Brown CM. Nicholson TJ, et al. Among authors: brown cm. RNA Biol. 2019 Apr;16(4):566-576. doi: 10.1080/15476286.2018.1509662. Epub 2018 Sep 18. RNA Biol. 2019. PMID: 30157725 Free PMC article.

9

Genome-wide correlation analysis suggests different roles of CRISPR-Cas systems in the acquisition of antibiotic resistance genes in diverse species.

Shehreen S, Chyou TY, Fineran PC, Brown CM. Shehreen S, et al. Among authors: brown cm. Philos Trans R Soc Lond B Biol Sci. 2019 May 13;374(1772):20180384. doi: 10.1098/rstb.2018.0384. Philos Trans R Soc Lond B Biol Sci. 2019. PMID: 30905286 Free PMC article.

10

Targeting of temperate phages drives loss of type I CRISPR-Cas systems.

Rollie C, Chevallereau A, Watson BNJ, Chyou TY, Fradet O, McLeod I, Fineran PC, Brown CM, Gandon S, Westra ER. Rollie C, et al. Among authors: brown cm. Nature. 2020 Feb;578(7793):149-153. doi: 10.1038/s41586-020-1936-2. Epub 2020 Jan 22. Nature. 2020. PMID: 31969710 Free PMC article.

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