Sartor MA - Search Results

1

Genomic binding of PAX8-PPARG fusion protein regulates cancer-related pathways and alters the immune landscape of thyroid cancer.

Zhang Y, Yu J, Grachtchouk V, Qin T, Lumeng CN, Sartor MA, Koenig RJ. Zhang Y, et al. Among authors: sartor ma. Oncotarget. 2017 Jan 24;8(4):5761-5773. doi: 10.18632/oncotarget.14050. Oncotarget. 2017. PMID: 28008156 Free PMC article.

2

PePr: a peak-calling prioritization pipeline to identify consistent or differential peaks from replicated ChIP-Seq data.

Zhang Y, Lin YH, Johnson TD, Rozek LS, Sartor MA. Zhang Y, et al. Among authors: sartor ma. Bioinformatics. 2014 Sep 15;30(18):2568-75. doi: 10.1093/bioinformatics/btu372. Epub 2014 Jun 3. Bioinformatics. 2014. PMID: 24894502 Free PMC article.

3

Genomic binding and regulation of gene expression by the thyroid carcinoma-associated PAX8-PPARG fusion protein.

Zhang Y, Yu J, Lee C, Xu B, Sartor MA, Koenig RJ. Zhang Y, et al. Among authors: sartor ma. Oncotarget. 2015 Dec 1;6(38):40418-32. doi: 10.18632/oncotarget.6340. Oncotarget. 2015. PMID: 26595524 Free PMC article.

4

Subtypes of HPV-Positive Head and Neck Cancers Are Associated with HPV Characteristics, Copy Number Alterations, PIK3CA Mutation, and Pathway Signatures.

Zhang Y, Koneva LA, Virani S, Arthur AE, Virani A, Hall PB, Warden CD, Carey TE, Chepeha DB, Prince ME, McHugh JB, Wolf GT, Rozek LS, Sartor MA. Zhang Y, et al. Among authors: sartor ma. Clin Cancer Res. 2016 Sep 15;22(18):4735-45. doi: 10.1158/1078-0432.CCR-16-0323. Epub 2016 Apr 18. Clin Cancer Res. 2016. PMID: 27091409 Free PMC article.

5

Adipogenic Differentiation of Thyroid Cancer Cells Through the Pax8-PPARγ Fusion Protein Is Regulated by Thyroid Transcription Factor 1 (TTF-1).

Xu B, O'Donnell M, O'Donnell J, Yu J, Zhang Y, Sartor MA, Koenig RJ. Xu B, et al. Among authors: sartor ma. J Biol Chem. 2016 Sep 9;291(37):19274-86. doi: 10.1074/jbc.M116.740324. Epub 2016 Jul 19. J Biol Chem. 2016. PMID: 27435678 Free PMC article.

6

HPV Integration in HNSCC Correlates with Survival Outcomes, Immune Response Signatures, and Candidate Drivers.

Koneva LA, Zhang Y, Virani S, Hall PB, McHugh JB, Chepeha DB, Wolf GT, Carey TE, Rozek LS, Sartor MA. Koneva LA, et al. Among authors: sartor ma. Mol Cancer Res. 2018 Jan;16(1):90-102. doi: 10.1158/1541-7786.MCR-17-0153. Epub 2017 Sep 19. Mol Cancer Res. 2018. PMID: 28928286 Free PMC article.

7

Expressed HNSCC variants by HPV-status in a well-characterized Michigan cohort.

Qin T, Zhang Y, Zarins KR, Jones TR, Virani S, Peterson LA, McHugh JB, Chepeha D, Wolf GT, Rozek LS, Sartor MA. Qin T, et al. Among authors: sartor ma. Sci Rep. 2018 Jul 30;8(1):11458. doi: 10.1038/s41598-018-29599-w. Sci Rep. 2018. PMID: 30061624 Free PMC article.

8

IDH1-R132H acts as a tumor suppressor in glioma via epigenetic up-regulation of the DNA damage response.

Núñez FJ, Mendez FM, Kadiyala P, Alghamri MS, Savelieff MG, Garcia-Fabiani MB, Haase S, Koschmann C, Calinescu AA, Kamran N, Saxena M, Patel R, Carney S, Guo MZ, Edwards M, Ljungman M, Qin T, Sartor MA, Tagett R, Venneti S, Brosnan-Cashman J, Meeker A, Gorbunova V, Zhao L, Kremer DM, Zhang L, Lyssiotis CA, Jones L, Herting CJ, Ross JL, Hambardzumyan D, Hervey-Jumper S, Figueroa ME, Lowenstein PR, Castro MG. Núñez FJ, et al. Among authors: sartor ma. Sci Transl Med. 2019 Feb 13;11(479):eaaq1427. doi: 10.1126/scitranslmed.aaq1427. Sci Transl Med. 2019. PMID: 30760578 Free PMC article.

9

Poly-Enrich: count-based methods for gene set enrichment testing with genomic regions.

Lee CT, Cavalcante RG, Lee C, Qin T, Patil S, Wang S, Tsai ZTY, Boyle AP, Sartor MA. Lee CT, et al. Among authors: sartor ma. NAR Genom Bioinform. 2020 Mar;2(1):lqaa006. doi: 10.1093/nargab/lqaa006. Epub 2020 Feb 6. NAR Genom Bioinform. 2020. PMID: 32051932 Free PMC article.

10

Testing Proximity of Genomic Regions to Transcription Start Sites and Enhancers Complements Gene Set Enrichment Testing.

Lee C, Wang K, Qin T, Sartor MA. Lee C, et al. Among authors: sartor ma. Front Genet. 2020 Mar 6;11:199. doi: 10.3389/fgene.2020.00199. eCollection 2020. Front Genet. 2020. PMID: 32211031 Free PMC article.

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