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Page 1
Construction and Analysis of Two Genome-Scale Deletion Libraries for Bacillus subtilis.
Koo BM, Kritikos G, Farelli JD, Todor H, Tong K, Kimsey H, Wapinski I, Galardini M, Cabal A, Peters JM, Hachmann AB, Rudner DZ, Allen KN, Typas A, Gross CA. Koo BM, et al. Among authors: galardini m. Cell Syst. 2017 Mar 22;4(3):291-305.e7. doi: 10.1016/j.cels.2016.12.013. Epub 2017 Feb 8. Cell Syst. 2017. PMID: 28189581 Free PMC article.
Bacterial retrons encode phage-defending tripartite toxin-antitoxin systems.
Bobonis J, Mitosch K, Mateus A, Karcher N, Kritikos G, Selkrig J, Zietek M, Monzon V, Pfalz B, Garcia-Santamarina S, Galardini M, Sueki A, Kobayashi C, Stein F, Bateman A, Zeller G, Savitski MM, Elfenbein JR, Andrews-Polymenis HL, Typas A. Bobonis J, et al. Among authors: galardini m. Nature. 2022 Sep;609(7925):144-150. doi: 10.1038/s41586-022-05091-4. Epub 2022 Jul 18. Nature. 2022. PMID: 35850148
Phenotype inference in an Escherichia coli strain panel.
Galardini M, Koumoutsi A, Herrera-Dominguez L, Cordero Varela JA, Telzerow A, Wagih O, Wartel M, Clermont O, Denamur E, Typas A, Beltrao P. Galardini M, et al. Elife. 2017 Dec 27;6:e31035. doi: 10.7554/eLife.31035. Elife. 2017. PMID: 29280730 Free PMC article.
Nutritional preferences of human gut bacteria reveal their metabolic idiosyncrasies.
Tramontano M, Andrejev S, Pruteanu M, Klünemann M, Kuhn M, Galardini M, Jouhten P, Zelezniak A, Zeller G, Bork P, Typas A, Patil KR. Tramontano M, et al. Among authors: galardini m. Nat Microbiol. 2018 Apr;3(4):514-522. doi: 10.1038/s41564-018-0123-9. Epub 2018 Mar 19. Nat Microbiol. 2018. PMID: 29556107
High-throughput functional characterization of protein phosphorylation sites in yeast.
Viéitez C, Busby BP, Ochoa D, Mateus A, Memon D, Galardini M, Yildiz U, Trovato M, Jawed A, Geiger AG, Oborská-Oplová M, Potel CM, Vonesch SC, Szu Tu C, Shahraz M, Stein F, Steinmetz LM, Panse VG, Noh KM, Savitski MM, Typas A, Beltrao P. Viéitez C, et al. Among authors: galardini m. Nat Biotechnol. 2022 Mar;40(3):382-390. doi: 10.1038/s41587-021-01051-x. Epub 2021 Oct 18. Nat Biotechnol. 2022. PMID: 34663920 Free PMC article.
From pangenome to panphenome and back.
Galardini M, Mengoni A, Mocali S. Galardini M, et al. Methods Mol Biol. 2015;1231:257-70. doi: 10.1007/978-1-4939-1720-4_16. Methods Mol Biol. 2015. PMID: 25343870
MeDuSa: a multi-draft based scaffolder.
Bosi E, Donati B, Galardini M, Brunetti S, Sagot MF, Lió P, Crescenzi P, Fani R, Fondi M. Bosi E, et al. Among authors: galardini m. Bioinformatics. 2015 Aug 1;31(15):2443-51. doi: 10.1093/bioinformatics/btv171. Epub 2015 Mar 25. Bioinformatics. 2015. PMID: 25810435
44 results