Pope PB - Search Results

1

Kunath BJ, Bremges A, Weimann A, McHardy AC, Pope PB. Kunath BJ, et al. Among authors: pope pb. Methods Mol Biol. 2017;1588:255-277. doi: 10.1007/978-1-4939-6899-2_20. Methods Mol Biol. 2017. PMID: 28417375

2

Adaptation to herbivory by the Tammar wallaby includes bacterial and glycoside hydrolase profiles different from other herbivores.

Pope PB, Denman SE, Jones M, Tringe SG, Barry K, Malfatti SA, McHardy AC, Cheng JF, Hugenholtz P, McSweeney CS, Morrison M. Pope PB, et al. Proc Natl Acad Sci U S A. 2010 Aug 17;107(33):14793-8. doi: 10.1073/pnas.1005297107. Epub 2010 Jul 28. Proc Natl Acad Sci U S A. 2010. PMID: 20668243 Free PMC article.

3

Taxonomic metagenome sequence assignment with structured output models.

Patil KR, Haider P, Pope PB, Turnbaugh PJ, Morrison M, Scheffer T, McHardy AC. Patil KR, et al. Among authors: pope pb. Nat Methods. 2011 Mar;8(3):191-2. doi: 10.1038/nmeth0311-191. Nat Methods. 2011. PMID: 21358620 Free PMC article. No abstract available.

4

Isolation of Succinivibrionaceae implicated in low methane emissions from Tammar wallabies.

Pope PB, Smith W, Denman SE, Tringe SG, Barry K, Hugenholtz P, McSweeney CS, McHardy AC, Morrison M. Pope PB, et al. Science. 2011 Jul 29;333(6042):646-8. doi: 10.1126/science.1205760. Epub 2011 Jun 30. Science. 2011. PMID: 21719642

5

Metagenomics of the Svalbard reindeer rumen microbiome reveals abundance of polysaccharide utilization loci.

Pope PB, Mackenzie AK, Gregor I, Smith W, Sundset MA, McHardy AC, Morrison M, Eijsink VG. Pope PB, et al. PLoS One. 2012;7(6):e38571. doi: 10.1371/journal.pone.0038571. Epub 2012 Jun 6. PLoS One. 2012. PMID: 22701672 Free PMC article.

6

De novo prediction of the genomic components and capabilities for microbial plant biomass degradation from (meta-)genomes.

Weimann A, Trukhina Y, Pope PB, Konietzny SG, McHardy AC. Weimann A, et al. Among authors: pope pb. Biotechnol Biofuels. 2013 Feb 15;6(1):24. doi: 10.1186/1754-6834-6-24. Biotechnol Biofuels. 2013. PMID: 23414703 Free PMC article.

7

Inference of phenotype-defining functional modules of protein families for microbial plant biomass degraders.

Konietzny SG, Pope PB, Weimann A, McHardy AC. Konietzny SG, et al. Among authors: pope pb. Biotechnol Biofuels. 2014 Sep 9;7(1):124. doi: 10.1186/s13068-014-0124-8. eCollection 2014. Biotechnol Biofuels. 2014. PMID: 25342967 Free PMC article.

8

Improved metagenome assemblies and taxonomic binning using long-read circular consensus sequence data.

Frank JA, Pan Y, Tooming-Klunderud A, Eijsink VGH, McHardy AC, Nederbragt AJ, Pope PB. Frank JA, et al. Among authors: pope pb. Sci Rep. 2016 May 9;6:25373. doi: 10.1038/srep25373. Sci Rep. 2016. PMID: 27156482 Free PMC article.

9

Novel Syntrophic Populations Dominate an Ammonia-Tolerant Methanogenic Microbiome.

Frank JA, Arntzen MØ, Sun L, Hagen LH, McHardy AC, Horn SJ, Eijsink VG, Schnürer A, Pope PB. Frank JA, et al. Among authors: pope pb. mSystems. 2016 Sep 13;1(5):e00092-16. doi: 10.1128/mSystems.00092-16. eCollection 2016 Sep-Oct. mSystems. 2016. PMID: 27822555 Free PMC article.

10

From Genomes to Phenotypes: Traitar, the Microbial Trait Analyzer.

Weimann A, Mooren K, Frank J, Pope PB, Bremges A, McHardy AC. Weimann A, et al. Among authors: pope pb. mSystems. 2016 Dec 27;1(6):e00101-16. doi: 10.1128/mSystems.00101-16. eCollection 2016 Nov-Dec. mSystems. 2016. PMID: 28066816 Free PMC article.

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