Sweeney TE - Search Results

1

Unsupervised Analysis of Transcriptomics in Bacterial Sepsis Across Multiple Datasets Reveals Three Robust Clusters.

Sweeney TE, Azad TD, Donato M, Haynes WA, Perumal TM, Henao R, Bermejo-Martin JF, Almansa R, Tamayo E, Howrylak JA, Choi A, Parnell GP, Tang B, Nichols M, Woods CW, Ginsburg GS, Kingsmore SF, Omberg L, Mangravite LM, Wong HR, Tsalik EL, Langley RJ, Khatri P. Sweeney TE, et al. Crit Care Med. 2018 Jun;46(6):915-925. doi: 10.1097/CCM.0000000000003084. Crit Care Med. 2018. PMID: 29537985 Free PMC article.

2

A comprehensive time-course-based multicohort analysis of sepsis and sterile inflammation reveals a robust diagnostic gene set.

Sweeney TE, Shidham A, Wong HR, Khatri P. Sweeney TE, et al. Sci Transl Med. 2015 May 13;7(287):287ra71. doi: 10.1126/scitranslmed.aaa5993. Sci Transl Med. 2015. PMID: 25972003 Free PMC article.

3

Comprehensive Validation of the FAIM3:PLAC8 Ratio in Time-matched Public Gene Expression Data.

Sweeney TE, Khatri P. Sweeney TE, et al. Am J Respir Crit Care Med. 2015 Nov 15;192(10):1260-1. doi: 10.1164/rccm.201507-1321LE. Am J Respir Crit Care Med. 2015. PMID: 26568247 Free PMC article. No abstract available.

4

Integrated, Multi-cohort Analysis Identifies Conserved Transcriptional Signatures across Multiple Respiratory Viruses.

Andres-Terre M, McGuire HM, Pouliot Y, Bongen E, Sweeney TE, Tato CM, Khatri P. Andres-Terre M, et al. Among authors: sweeney te. Immunity. 2015 Dec 15;43(6):1199-211. doi: 10.1016/j.immuni.2015.11.003. Immunity. 2015. PMID: 26682989 Free PMC article.

5

Genome-wide expression for diagnosis of pulmonary tuberculosis: a multicohort analysis.

Sweeney TE, Braviak L, Tato CM, Khatri P. Sweeney TE, et al. Lancet Respir Med. 2016 Mar;4(3):213-24. doi: 10.1016/S2213-2600(16)00048-5. Epub 2016 Feb 20. Lancet Respir Med. 2016. PMID: 26907218 Free PMC article.

6

Risk Stratification and Prognosis in Sepsis: What Have We Learned from Microarrays?

Sweeney TE, Wong HR. Sweeney TE, et al. Clin Chest Med. 2016 Jun;37(2):209-18. doi: 10.1016/j.ccm.2016.01.003. Epub 2016 Mar 10. Clin Chest Med. 2016. PMID: 27229638 Free PMC article. Review.

7

Blood transcriptional signatures for tuberculosis diagnosis: a glass half-empty perspective - Authors' reply.

Sweeney TE, Khatri P. Sweeney TE, et al. Lancet Respir Med. 2016 Jun;4(6):e29. doi: 10.1016/S2213-2600(16)30039-X. Lancet Respir Med. 2016. PMID: 27304800 No abstract available.

8

Robust classification of bacterial and viral infections via integrated host gene expression diagnostics.

Sweeney TE, Wong HR, Khatri P. Sweeney TE, et al. Sci Transl Med. 2016 Jul 6;8(346):346ra91. doi: 10.1126/scitranslmed.aaf7165. Sci Transl Med. 2016. PMID: 27384347 Free PMC article.

9

Methods to increase reproducibility in differential gene expression via meta-analysis.

Sweeney TE, Haynes WA, Vallania F, Ioannidis JP, Khatri P. Sweeney TE, et al. Nucleic Acids Res. 2017 Jan 9;45(1):e1. doi: 10.1093/nar/gkw797. Epub 2016 Sep 14. Nucleic Acids Res. 2017. PMID: 27634930 Free PMC article.

10

Benchmarking Sepsis Gene Expression Diagnostics Using Public Data.

Sweeney TE, Khatri P. Sweeney TE, et al. Crit Care Med. 2017 Jan;45(1):1-10. doi: 10.1097/CCM.0000000000002021. Crit Care Med. 2017. PMID: 27681387 Free PMC article.

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